| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4396 |
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| Symbol | |
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| ID | 5093914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 5301022 |
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| End bp | 5304138 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644743820 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_001196722 |
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| Protein GI | 146302131 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.806316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGAAGA TGTCACAGTA TAAAACCATA GCAGAATCAA ACAATTTTAT TGTTTTAGAT
AAGTACGATA AATATTCAGT GCTTAATGAA GCACCTTCGA GTTATCAAAC GGAGGCTGCA
CTTGAGAAAG AACTTATCCA GGACTTAATC AATCAAGGAT ATGAAAATCC AGATCTAAAC
AGTATGGAAG CGCTATTGGC AAATGTCAGA GTGCAATTGC AGGCACTCAA TAACATGGCC
TTTTCAGATA GCGAATGGAC TCGTTTTGTA GAAGAATACT TAGACAAACC AAGTGATAAT
CTAGTTGAAA AAACTAGAAA AATTCATGAA AATTATATCT ACGATTTTGT TTTTGATGAT
GGACATATTC AAAATATTTA TTTAGTTGAC AAAAAGAATA TCGCTCGTAA TAAAGTACAG
GTAATTAAAC AATTTGAACA AAAAGGAACA CATGCCAATC GTTATGATGT TACAATTTTA
ATCAATGGCT TGCCTTTGGT ACAAGTAGAA CTAAAAAAGC GTGGTGTAGC TATTCGTGAA
GCATTTAACC AAGTGCATCG CTATACAAAA GAGAGTCTTA ACAGTACTAA TTCTCTTTTC
AAATACTTGC AGGTTTTTGT TATCTCGAAC GGAACGGACA GCCGCTATTT TGCAAACACT
GTTGAGCGAA ACAAAAACAG CTTTGACTTT ACTATGAACT GGGCAAAAGC TGATAATACA
TTGATTAAAG ACCTTAAAGA TTTTACTACA ACCTTTTTTG AAAAACGCAC GTTGTTAAAC
GTATTGCTTA CCTATTCCGT TTTTGACACA AGTGATACAT TACTAATTAT GCGACCTTAT
CAAATCGCAG CTACTGAAAG AATGTTATGG AAAATTCAAA GTTCCTTTCA AGCTAAAAAT
TGGTCTAAAG TAGAAAGCGG TGGTTATATT TGGCATACGA CAGGGTCGGG TAAAACGCTG
ACCAGTTTTA AAGCGGCTCG TTTAGCTACT GAATTAGATT TCATTGATAA AGTATTTTTT
GTAGTGGATC GCAAAGATTT GGACTTTCAA ACTATGAAAG AATACCAACG CTTTTCTCCC
GATAGTGTGA ACGGTTCGGA TAGTACAGCA GGCTTAAAGA GAAATTTGGA GAAAGATGAT
AATAAAATTA TTGTCACAAC TATTCAGAAG CTAAACAACT TGATGAAAAC AGAAAGTGAT
TTAGCCATTT ATCAAAAACA AGTAGTTTTT ATTTTTGATG AAGCACACCG TTCTCAGTTT
GGAGAAGCTC AAAAGAACCT GAATAAGAAG TTTAAAAAAT TCTATCAATT TGGTTTTACC
GGCACGCCGA TATTTGCAGG AATAAATGCA CTTGGTGCAG AAAGTACTCA AAGTGTGTTT
GGTTGCGAAT TGCATTCTTA TGTAATTACA GATGCGATTA GAGATGAAAA AGTACTGAAA
TTCAAAGTAG ATTACAATGA TGTTCGTCCA CAATTTAAAA GTATAGAAAC TGAGATTGAT
GAAAAAAAAT TAACTGCTGC AGAAAACAAA AAAGCATTTT TACATCCTGC CCGTATCAAA
GAAGTTTCAC AATACATCCT TAAGAATTTT AGAATTAAAA CGCATAGGAA TCAAGGTACA
AACAAAGGTT TTAATGCCAT GTTTGCTGTA AGTAGTGTGG ATGCAGCCAA ATGTTATTAT
GAAGAATTAA ACCACCTGCA AAAAGAAAGT GAAAAACCAT TAAGAATAGC AACGATATTC
TCTTACGCTG CCAATGAAGA GCAAAGTGCC ATTGGTGAAA TTGTCGATGA AAACTTTGAG
CCAACGGCAT TGGACAGCAG TGCCAAAGAA TTTTTAACGG CAGCAATAAA CGACTACAAC
ACAATGTTTA AAACAAGTTT TGGAGTCGAG AGCAAAGAGT TCCAAAACTA TTACCGTGAT
CTTGCAAAAC GTGTAAAAAA TAAAGAAATT GACCTTATCA TCGTAGTTGG TATGTTTCTT
ACTGGCTTTG ATGCTCCAAC GCTTAACACT CTGTTTGTCG ATAAGAACCT GCGTTATCAT
GGTTTAATGC AAGCTTTTTC TCGTACTAAT CGTATTTATG ATGCTACAAA AACCTTTGGA
AACATTATTA CTTTCAGAGA TTTAGAAACA GCTACTGTAG ATGCTATAAC CTTATTTGGA
GACAAAAACA CAAAAAACGT AGTACTTGAA AAGAGCTATA AAGAATATTT AGAAGGTTTT
ACAGACATTG CAACAGGACA TGCACGTAGA GGTTTCATAG ATGTGGTAAA AGACTTAAAT
GAAAAATTCC CTAATCACAA TGAAATTGTA ACGGAAAAAG ATAAAAAAGA ATTCTCAAAA
TTATTCGGAG AGTATTTACG AGTGGAAAAT ATCTTGCAGA ATTACGATGA GTTTACCAAT
CTCAAAGCAT TTCAAGGTAT TGATCTAAAT GATGGTCAAG CCATTCAGGA ATTCAAAGAA
AACTACTTTG TGTCAGACAA TGATATTGCA ATAATGCAAG AGATAAGTTT GTTACCGGAA
CGAACAATTC AAGATTATCG TTCTACTTAT AATGACATAC GCGATTGGTT AAGACGTGAA
AAAAGCGGAA AAGAAGCTGA AGAATCCACT ATAGATTGGG ATGATGTTGT CTTCGAAATA
GACCTACTTA AATCTCAAGA AATTAACCTG GATTATATTC TTGAATTGAT TTTTGAACAT
AATAAAAAGA ATAAAGACAA AGCCACCTTG ATAGAAGAAA TCCGCCGGGT GATTCGTGCA
AGTATAGGCA ACAGAGCAAA AGAAAGTTTA GTAGTAGATT TTATAAATGA AACAGACCTT
GAAACCATTC AAGATAAAGC AAATGTTATA GATTCATTCT TCAAATATGC TCAGGAAAAA
CAAAAAAAGG AGGCTTCAGA ATTAATTACA GATGAAAACT TAAATGAGGA AGAAGCAAAA
CGATATATTA CAGCATCTTT AAAGCGTGAA TTTGCCAATG AAAACGGAAC TGAACTCAAT
GCAATTTTAC CTAAAATGAG TCCTTTAAAT CCTCAGTATT TGACGAAAAA GCAAAGTGTA
TTCCAGAAAA TTAGCTTCTT TGTCGACAAA TTTAAAGGAG TTGGAGGGCA ATTGTAA
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| Protein sequence | MRKMSQYKTI AESNNFIVLD KYDKYSVLNE APSSYQTEAA LEKELIQDLI NQGYENPDLN
SMEALLANVR VQLQALNNMA FSDSEWTRFV EEYLDKPSDN LVEKTRKIHE NYIYDFVFDD
GHIQNIYLVD KKNIARNKVQ VIKQFEQKGT HANRYDVTIL INGLPLVQVE LKKRGVAIRE
AFNQVHRYTK ESLNSTNSLF KYLQVFVISN GTDSRYFANT VERNKNSFDF TMNWAKADNT
LIKDLKDFTT TFFEKRTLLN VLLTYSVFDT SDTLLIMRPY QIAATERMLW KIQSSFQAKN
WSKVESGGYI WHTTGSGKTL TSFKAARLAT ELDFIDKVFF VVDRKDLDFQ TMKEYQRFSP
DSVNGSDSTA GLKRNLEKDD NKIIVTTIQK LNNLMKTESD LAIYQKQVVF IFDEAHRSQF
GEAQKNLNKK FKKFYQFGFT GTPIFAGINA LGAESTQSVF GCELHSYVIT DAIRDEKVLK
FKVDYNDVRP QFKSIETEID EKKLTAAENK KAFLHPARIK EVSQYILKNF RIKTHRNQGT
NKGFNAMFAV SSVDAAKCYY EELNHLQKES EKPLRIATIF SYAANEEQSA IGEIVDENFE
PTALDSSAKE FLTAAINDYN TMFKTSFGVE SKEFQNYYRD LAKRVKNKEI DLIIVVGMFL
TGFDAPTLNT LFVDKNLRYH GLMQAFSRTN RIYDATKTFG NIITFRDLET ATVDAITLFG
DKNTKNVVLE KSYKEYLEGF TDIATGHARR GFIDVVKDLN EKFPNHNEIV TEKDKKEFSK
LFGEYLRVEN ILQNYDEFTN LKAFQGIDLN DGQAIQEFKE NYFVSDNDIA IMQEISLLPE
RTIQDYRSTY NDIRDWLRRE KSGKEAEEST IDWDDVVFEI DLLKSQEINL DYILELIFEH
NKKNKDKATL IEEIRRVIRA SIGNRAKESL VVDFINETDL ETIQDKANVI DSFFKYAQEK
QKKEASELIT DENLNEEEAK RYITASLKRE FANENGTELN AILPKMSPLN PQYLTKKQSV
FQKISFFVDK FKGVGGQL
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