| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4280 |
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| Symbol | |
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| ID | 5090616 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 5170728 |
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| End bp | 5171492 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644743704 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001196607 |
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| Protein GI | 146302016 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.91487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGTAA ATACAAAAAC AGCTCTGGTT ACAGGAGGAA GCAGAGGTTT AGGAAAAAAT
ATGGCAATTG CGATTGCAAA GAAAGGAATC GACGTAATTA TTACGTACAA CAGCAAAAAA
GAAGAAGCTG ATTTAGTAGT AAAAGAAATC GAAAGTTTAG GTCAAAAAGC GGCTGCACTT
CAATTAAATG TTGCTGAATC AAATACTTTT GATGCTTTCT ACAAAGAAGT AGAATCAACT
TTAAAAAACA CTTTTAAAAC AGACAAATTT GACTTTTTAA TCAACAATGC CGGAATTGGA
ATTCACAATT CTTTCATTGG AACAACTGAA GCTGAATTTG ATCAATTAAC TAACATTCAG
TTTAAAGGTC CGTTCTTCTT AACTCAAAAA GGTTTAAACG TAATGAATGA TGGCGGCGGA
ATCGTAAATA TTTCTACAGG TTTAGCCAGA TTCTCATTTC CGGGTTATGC TGCTTATGCT
TCTATGAAAG GTGCCATTGA AACTTTAACT AAATATCAGG CAAAAGAACT TGGAGCAAGA
AAAATCAGAG TTAATGTCGT GGCTCCAGGC GCTATCGAAA CAGATTTTGG AGGCGGAGTG
GTTCGCGACA ATGAGCAGAT GAACCAGCAG ATTGCTTCAG TAACTGCTCT TGGAAGAGTT
GGTTTACCAG ATGATATTGG CGGTGTTGTT GCCTTTTTAT GTACCGAAGA GGCTCGCTGG
ATAAACGCAC AAAGAATCGA AGCTTCTGGG GGAATGATGC TTTAA
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| Protein sequence | MAVNTKTALV TGGSRGLGKN MAIAIAKKGI DVIITYNSKK EEADLVVKEI ESLGQKAAAL
QLNVAESNTF DAFYKEVEST LKNTFKTDKF DFLINNAGIG IHNSFIGTTE AEFDQLTNIQ
FKGPFFLTQK GLNVMNDGGG IVNISTGLAR FSFPGYAAYA SMKGAIETLT KYQAKELGAR
KIRVNVVAPG AIETDFGGGV VRDNEQMNQQ IASVTALGRV GLPDDIGGVV AFLCTEEARW
INAQRIEASG GMML
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