| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_4240 |
|---|
| Symbol | |
|---|
| ID | 5092282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 5107523 |
|---|
| End bp | 5109145 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644743659 |
|---|
| Product | patatin |
|---|
| Protein accession | YP_001196567 |
|---|
| Protein GI | 146301976 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.579844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACAG ATCTAGAATT AATTAAAAAA GATATCGGAG CAGAAAAACT GGGAACAAAT
CTGTTATCAG TTTCAGAACG GCTGGATAAA CTGTCAGATA AAAGATTTTC AGATGTAATT
TCTAAAGACG AAAATGGACG TATCCTGCAA TGGATCAATT TTGTACAAGA AGGAGGCGGA
ACACTCGGTA TTTCATTAGT GGGTTACGCT TTTGTGCTAG AATATGTCGG CATACGGTTT
CTTAGAATTG CAGGAACCAG CGCAGGAGCC ATTAATACCT TATTTCTTGC TGCAATGGGC
AGTAAAGATG AACCTAAATC AGCGGAGTTA TATGATATGA TGATGGATGA TAAGCGGTTC
TCTCTCAAAA GTTTTGTTGA TGCCAAATTG GGAATTGTAA AAAAAATAAT TTTTTCTTTC
ACCAGCGGTT CGAATTTTTT GAAAAATTTA GCTTGGTTTT ATGGAATTAT CGCGCTGCTC
GCTTTAATTA TTCTGCCGAT TTTTATGGCG ATTGGATTTT CTCTAAAAAT TGCATATTTC
GTTTTTTTAG CGGTTTTTTT GTTTATCACC GTAAGAGTAA TAATGTTGTT ATATAGATTT
CACAAATACA ATTACGGCAT TAATCCCGGT AAAAGTTTTG AGGAATTTTT AAAGAAGGAA
TTAGAAATTT TCGGAATCAA AAATCTAAAA GATTTAAAAT CAAAATCAGA AGGTGATTTT
ATACTAAATG ATAAAATTTT CATGAGTACA AAAGGTGCCA GAGTGGAGTC ACTCGATAAT
CTTTCCAGTC TTAAAAATAC GGTATCAGAT AAAAAATGGT ATTCGGACAT CTACGATGAG
GTGCTTAAAA AAACAGATCA TAATAAGTCT TTTGAACCTA ATGATTCAAA TTTTAATCAA
AACCCGCCTA ATTTGTATCT TATAAGGGAA GAAGACTCTC AGGATTACAA TGCTTTAACC
AATAAAGAGA AAGCACATCA GAAAGAAAGC ATTGATAAAA TTGGTTTTGA CTATTCTTTT
GTGACAACAG ATATTGCCAA TCAATGCAAA ATTGTACTGC CTAAAGACGA AAAACTGTAC
AAGTTTGATC CTGAGGGCAG CCCCGCTGTA TTTGTAAGAG CTTCTATGGC AATACCTGTG
TTTTTTGAAC CGAAAAAAAT TGCCGTAAAT AATACCAGTG ACTGGCTGAA AACAAAAGGA
TTTATTAATC TCTCTACCGA AAGTATTTTT ATTGACGGAG GTTCACTTTC TAATTTCCCT
ATTAATTTAT TTCATAACAG TCATATAACA GAGGCCAGGG TGCCTATTTT TGGAGCGCGC
ATACAAGATG AGAAGCCTGT TGAAAATAAA AAGCTGCGCC TTACCTTTGC AAGTTACGCT
TTCAGTATTC TCAATACACT GCGAAATAAC GAAGATTCAT CATTTTTGGC AATTAATCCG
TTTTATAAAA AATTCAGCAT TGCCGAAATA AACACGTATG ATACAAAAAT AAGCTGGCTG
AATTTTGCAC TGACTAAAAA TGAAAAAAGA AAATTATTCT TAGCAGGTGT AGAAGCAGCA
TTAGTTTTTT TGGAGCAGTT TAACTGGGAA GTGTATAAAG AGGAACGAAA AAAAACATTG
TAA
|
|---|
| Protein sequence | MKTDLELIKK DIGAEKLGTN LLSVSERLDK LSDKRFSDVI SKDENGRILQ WINFVQEGGG
TLGISLVGYA FVLEYVGIRF LRIAGTSAGA INTLFLAAMG SKDEPKSAEL YDMMMDDKRF
SLKSFVDAKL GIVKKIIFSF TSGSNFLKNL AWFYGIIALL ALIILPIFMA IGFSLKIAYF
VFLAVFLFIT VRVIMLLYRF HKYNYGINPG KSFEEFLKKE LEIFGIKNLK DLKSKSEGDF
ILNDKIFMST KGARVESLDN LSSLKNTVSD KKWYSDIYDE VLKKTDHNKS FEPNDSNFNQ
NPPNLYLIRE EDSQDYNALT NKEKAHQKES IDKIGFDYSF VTTDIANQCK IVLPKDEKLY
KFDPEGSPAV FVRASMAIPV FFEPKKIAVN NTSDWLKTKG FINLSTESIF IDGGSLSNFP
INLFHNSHIT EARVPIFGAR IQDEKPVENK KLRLTFASYA FSILNTLRNN EDSSFLAINP
FYKKFSIAEI NTYDTKISWL NFALTKNEKR KLFLAGVEAA LVFLEQFNWE VYKEERKKTL
|
|---|
| |