Gene Fjoh_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_4123 
Symbol 
ID5094033 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4955509 
End bp4956651 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content38% 
IMG OID644743542 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_001196450 
Protein GI146301859 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACCAT TAGAAGGATT AATTGTATTA GAGTTCTGCC AGTTTTTGGC GGGTCCTTCT 
GCCGGATTAA AGTTAGCCGA TTTAGGCGCG AGAATTATTA AAATTGAACG TCCCGTAAAA
GGCGAAGCCT GCCGACAATT AAGCATCAAA GATCTTTTTG TGGATGACAG CAGTCTTTTG
TTTCACACAA TTAACAGAAA CAAAGAATCT TTTGCAGCCG ATTTAAAAAA TCCTGATGAT
TTAGTTTTAA TTAAAAAACT AATCGAAAAA GCTGATATTA TGACGCATAA TTTCAGGCCA
GGTGTAATGG AAAAAATCGG TTTAGATTTT ACTGCATCAC TTGCGATTAA TCCAAAAATA
ATATACGGAA CCATAACAGG TTACGGCGAT AAAGGTCCTT GGGCAAAAAA ACCGGGACAA
GATTTGCTTT TACAGTCACT CTCTGGCTTA AGCTGGCTGA GCGGACGAAA AAGTCAGGGC
CCAGTTCCAT TTGGTTTGGC TGTCGCCGAT TTAATGTGCG GGAATCATTT CGTACAGGGA
ATTTTAGCCG CATTATTAAA AAGAGCCAAA ACCGGAAAAG GCGTTTTGGT TGAAGTGAGT
TTACTGGAAT CTATTTTGGA TGTTCAGTTT GAAGCAATTA CTTCTTTCTT AAATGATGGC
GGGCAACAAC CGGAACGAGG CGATATTAAA GGAAGCGCAC ACGCTTTTTT AAGCGCGCCT
TACGGAGTTT ATAAAACACA AGACGATTAT ATTTCGCTGG CAATGGGCGA TTTACTTTTT
ATAGGAAATA CACTTGGAGT CGATTTAAAT CAATATGCAG CTAAACATCT CTGGTTTGAA
AAAAGAGATG AAATCAGAAT TCTTTTAGCC GATAAATTAG CAGAACAAAA AGCAGATTAT
TGGTTAGAAT TGCTTCAAAA ACAAGGTATT TGGGCAGGAA AAGTTCTCAA TTATGAAACT
TTAGACCAAC AGCAATTTGT TAATGAATTA CACTTAAAAC AAACCGTAAA AAATTCTGAC
GGCGAAACTT TGATTACAAC CCGAAGTCCA ATTCAGCTTG ACGGTAAAAT TTTAAGCAGC
ACAAAAGCAG CTCCAAAAGT GGGCGAAGAT AATGCAGTAA TACACAAAGA GTTTATTCAG
TAA
 
Protein sequence
MKPLEGLIVL EFCQFLAGPS AGLKLADLGA RIIKIERPVK GEACRQLSIK DLFVDDSSLL 
FHTINRNKES FAADLKNPDD LVLIKKLIEK ADIMTHNFRP GVMEKIGLDF TASLAINPKI
IYGTITGYGD KGPWAKKPGQ DLLLQSLSGL SWLSGRKSQG PVPFGLAVAD LMCGNHFVQG
ILAALLKRAK TGKGVLVEVS LLESILDVQF EAITSFLNDG GQQPERGDIK GSAHAFLSAP
YGVYKTQDDY ISLAMGDLLF IGNTLGVDLN QYAAKHLWFE KRDEIRILLA DKLAEQKADY
WLELLQKQGI WAGKVLNYET LDQQQFVNEL HLKQTVKNSD GETLITTRSP IQLDGKILSS
TKAAPKVGED NAVIHKEFIQ