Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_4123 |
Symbol | |
ID | 5094033 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 4955509 |
End bp | 4956651 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644743542 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001196450 |
Protein GI | 146301859 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCAT TAGAAGGATT AATTGTATTA GAGTTCTGCC AGTTTTTGGC GGGTCCTTCT GCCGGATTAA AGTTAGCCGA TTTAGGCGCG AGAATTATTA AAATTGAACG TCCCGTAAAA GGCGAAGCCT GCCGACAATT AAGCATCAAA GATCTTTTTG TGGATGACAG CAGTCTTTTG TTTCACACAA TTAACAGAAA CAAAGAATCT TTTGCAGCCG ATTTAAAAAA TCCTGATGAT TTAGTTTTAA TTAAAAAACT AATCGAAAAA GCTGATATTA TGACGCATAA TTTCAGGCCA GGTGTAATGG AAAAAATCGG TTTAGATTTT ACTGCATCAC TTGCGATTAA TCCAAAAATA ATATACGGAA CCATAACAGG TTACGGCGAT AAAGGTCCTT GGGCAAAAAA ACCGGGACAA GATTTGCTTT TACAGTCACT CTCTGGCTTA AGCTGGCTGA GCGGACGAAA AAGTCAGGGC CCAGTTCCAT TTGGTTTGGC TGTCGCCGAT TTAATGTGCG GGAATCATTT CGTACAGGGA ATTTTAGCCG CATTATTAAA AAGAGCCAAA ACCGGAAAAG GCGTTTTGGT TGAAGTGAGT TTACTGGAAT CTATTTTGGA TGTTCAGTTT GAAGCAATTA CTTCTTTCTT AAATGATGGC GGGCAACAAC CGGAACGAGG CGATATTAAA GGAAGCGCAC ACGCTTTTTT AAGCGCGCCT TACGGAGTTT ATAAAACACA AGACGATTAT ATTTCGCTGG CAATGGGCGA TTTACTTTTT ATAGGAAATA CACTTGGAGT CGATTTAAAT CAATATGCAG CTAAACATCT CTGGTTTGAA AAAAGAGATG AAATCAGAAT TCTTTTAGCC GATAAATTAG CAGAACAAAA AGCAGATTAT TGGTTAGAAT TGCTTCAAAA ACAAGGTATT TGGGCAGGAA AAGTTCTCAA TTATGAAACT TTAGACCAAC AGCAATTTGT TAATGAATTA CACTTAAAAC AAACCGTAAA AAATTCTGAC GGCGAAACTT TGATTACAAC CCGAAGTCCA ATTCAGCTTG ACGGTAAAAT TTTAAGCAGC ACAAAAGCAG CTCCAAAAGT GGGCGAAGAT AATGCAGTAA TACACAAAGA GTTTATTCAG TAA
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Protein sequence | MKPLEGLIVL EFCQFLAGPS AGLKLADLGA RIIKIERPVK GEACRQLSIK DLFVDDSSLL FHTINRNKES FAADLKNPDD LVLIKKLIEK ADIMTHNFRP GVMEKIGLDF TASLAINPKI IYGTITGYGD KGPWAKKPGQ DLLLQSLSGL SWLSGRKSQG PVPFGLAVAD LMCGNHFVQG ILAALLKRAK TGKGVLVEVS LLESILDVQF EAITSFLNDG GQQPERGDIK GSAHAFLSAP YGVYKTQDDY ISLAMGDLLF IGNTLGVDLN QYAAKHLWFE KRDEIRILLA DKLAEQKADY WLELLQKQGI WAGKVLNYET LDQQQFVNEL HLKQTVKNSD GETLITTRSP IQLDGKILSS TKAAPKVGED NAVIHKEFIQ
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