Gene Fjoh_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3988 
Symbol 
ID5089941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4771596 
End bp4772594 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content34% 
IMG OID644743409 
Productalcohol dehydrogenase 
Protein accessionYP_001196317 
Protein GI146301726 
COG category[C] Energy production and conversion
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.856682 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAG TTATATTACA GGAAAACCGA GAATTTAAGC TCGAAACAGT GGCAATTCCA 
CAGCCAGAAC GTAATCAGAT TCAGGTAAAG ATTACAGCTT CAGGATTTAA CCCAATTGAT
TATCAAATGA CTGAAAATAA ATCTGAAAGA AAACTGATTC ATTCACCAAT TCTGGGACGT
GAATTTTCAG GAATAATTAC AGCAATTGGT ACAGAAATAA CAGAATTTAA AATTGGAGAT
GCCGTTTTCT GCGGTTCAGG CAGTATGGGA TCTAATGGAA CTTATGCCGA ATATATTTGT
GTTCCAGAGG AAATCGCAGT TAAAAAACCT CAAAATATTT CTTTTGAAGA AGCAGCAGGA
ATTCCATCGG CAGGACTTAC GGCATTACAA TCATTTAAAA GAATGAATGC TTCTGCAGCT
GATTCGATAT TTATTACGGG TGCTGCCGGC GGAGTGGGAA ATATGTTTAT AAAACTTCTT
ACAGCTAATA GTTTTAAAAA ATTTTGGGTA ACAGCCGGAA ATGATGAAAG TATCGCTTCT
TTGATAAACC TTGGAGTAAA ACGAGAGCAA ATCATCAATT ATAAAAAAGA AAATGTATAC
GAAACTGCTC TTTCTTTAAA CGAAAATAAA AAGTTTGATA TCGTTGTGGA TTTGGTTGGA
AATAGTATTG CTGATATCGC TGCAAGACTT TTAAAAATAA ACGGAACTTA TATTGACGTC
ACAAATTTTT TAACGGCTGA ATCCCGCAGT ATTCTTTTTT CTAAAGGCGT TGCAATTTAC
AATATTTCTA ATTATGCATA CGGAATTGAG AAGCAGTATG AATATTACAA AAATGGTTTA
AGTGAGTTGA GTTATTTAAT AGAAAATGAA ATAATTAGTC CACCCAGTAT TTCTGTAATT
GGTGAGCTAA ATGCGGAAAC TGTCAATAAA GCGCTGGCTA TTTTGCGTGA GAACAAAACG
TATGGAAGAA AATTAATAAT GAAGATTAAT AAAGAATGA
 
Protein sequence
MKAVILQENR EFKLETVAIP QPERNQIQVK ITASGFNPID YQMTENKSER KLIHSPILGR 
EFSGIITAIG TEITEFKIGD AVFCGSGSMG SNGTYAEYIC VPEEIAVKKP QNISFEEAAG
IPSAGLTALQ SFKRMNASAA DSIFITGAAG GVGNMFIKLL TANSFKKFWV TAGNDESIAS
LINLGVKREQ IINYKKENVY ETALSLNENK KFDIVVDLVG NSIADIAARL LKINGTYIDV
TNFLTAESRS ILFSKGVAIY NISNYAYGIE KQYEYYKNGL SELSYLIENE IISPPSISVI
GELNAETVNK ALAILRENKT YGRKLIMKIN KE