Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3987 |
Symbol | |
ID | 5089940 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4771105 |
End bp | 4771599 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 644743408 |
Product | cupin 2 domain-containing protein |
Protein accession | YP_001196316 |
Protein GI | 146301725 |
COG category | [S] Function unknown |
COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.966145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAACAA TACCAAGAAG AATCGTTACG GGCATACGAA ACGGAAAATC AATTATCGAA CAAAATGAAA TCGTGAGCAA TGTATCAGAG CATTTTCCGG GATTAATTAT TTCTGATATC TGGTCAACTG ATAGTACACC GGCTAAATTT GAAGAAAAAA GAATTGAAAA TACCGCTTTT CCCAATACAC CAAAAAACGG AAGTTATTTT CGGTATGTAC AAATTCCGCC CGATAAAGAT TTAGGAATAG AAGCACCTCA AGGTCAGCCT CATCCGTTAA TGCATCAAAC TGATACTTTA GATTACATCG TCATTTTGGC AGGTGAGATT TATTTGATAG TTGATGAAGA AGAAACGCTT TTACAAGCTG GAGATATCGT AATTCAGCGT GGTACAAATC ATGCCTGGAG CAATCGTTCA GATTTGCCCT GTATTCAGTT AGCTGTTTTA CTGGATGCCA AAAAAAGAGT AATTAATTTC AAGGAATTGT TATAG
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Protein sequence | MKTIPRRIVT GIRNGKSIIE QNEIVSNVSE HFPGLIISDI WSTDSTPAKF EEKRIENTAF PNTPKNGSYF RYVQIPPDKD LGIEAPQGQP HPLMHQTDTL DYIVILAGEI YLIVDEEETL LQAGDIVIQR GTNHAWSNRS DLPCIQLAVL LDAKKRVINF KELL
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