Gene Fjoh_3987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3987 
Symbol 
ID5089940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4771105 
End bp4771599 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content36% 
IMG OID644743408 
Productcupin 2 domain-containing protein 
Protein accessionYP_001196316 
Protein GI146301725 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.966145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAA TACCAAGAAG AATCGTTACG GGCATACGAA ACGGAAAATC AATTATCGAA 
CAAAATGAAA TCGTGAGCAA TGTATCAGAG CATTTTCCGG GATTAATTAT TTCTGATATC
TGGTCAACTG ATAGTACACC GGCTAAATTT GAAGAAAAAA GAATTGAAAA TACCGCTTTT
CCCAATACAC CAAAAAACGG AAGTTATTTT CGGTATGTAC AAATTCCGCC CGATAAAGAT
TTAGGAATAG AAGCACCTCA AGGTCAGCCT CATCCGTTAA TGCATCAAAC TGATACTTTA
GATTACATCG TCATTTTGGC AGGTGAGATT TATTTGATAG TTGATGAAGA AGAAACGCTT
TTACAAGCTG GAGATATCGT AATTCAGCGT GGTACAAATC ATGCCTGGAG CAATCGTTCA
GATTTGCCCT GTATTCAGTT AGCTGTTTTA CTGGATGCCA AAAAAAGAGT AATTAATTTC
AAGGAATTGT TATAG
 
Protein sequence
MKTIPRRIVT GIRNGKSIIE QNEIVSNVSE HFPGLIISDI WSTDSTPAKF EEKRIENTAF 
PNTPKNGSYF RYVQIPPDKD LGIEAPQGQP HPLMHQTDTL DYIVILAGEI YLIVDEEETL
LQAGDIVIQR GTNHAWSNRS DLPCIQLAVL LDAKKRVINF KELL