Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3945 |
Symbol | |
ID | 5089898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4703667 |
End bp | 4707236 |
Gene Length | 3570 bp |
Protein Length | 1189 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644743366 |
Product | TonB-dependent receptor |
Protein accession | YP_001196274 |
Protein GI | 146301683 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAA ATCATGATAT AGGCCTGCTA TTGCCTAAAA AAATCATCAA CCTTACTTTT ATTTTATTTA TGAGAGTATT CATTTTAGTT CTGTATTTAG GATTAACCAG TATCTACGCT AATAGTGCCA AAGCACAAAA TGAAATCTCA GTAAAGGTTC AGGGAGCTTC TTTGCAAACC CTTTTTACAA CCATTCAGCA GAAAAGCGAT TACGTGTTTT TTTATAACGA CGATCTATTG TCTTCTGCAA AAAAAGTAAG TTTAAACCAA TACGCCACCG TTACGGAAAT TTTAGATACA GCTTTGTCAA ACACAGGATT AACCTATACT ATTATTGACA AACAAATTGT AATTAAAAAA AGTAAAAAAA TACAGCCCGT TCAACAGCAG GAATATGATA TTACCGGTAC TGTAACCGAT AAAAGCGGAA ATCCTTTAAT TGGCGTTAAC GTAATTCTCG TTAGTAATAA AAGCAATTGG GACATAACAC GCGAAAAAGG TGAATTTAGA ATAAGAGCCG CAGCTTCAGA TTCATTACGT TTTGATTATT TAGGATATAA ATCAAAAACG GTAGGGATTA ATAACAAAAG AGTAATCAAC GTTATCCTGA CACCAGATGT TATGGAACTT ACAGGTGTGG CAGTAGTAGC TTCAAACGGA TATACTGATA TTCCAAAAGA AAGAGTAACC GGAGCTTTTG AAGTTATTGG AGCCAAAGAA CTGGCCGAAG TTCCAACAGT TGACATTCAG TCAAGACTTG AAGGAAAAAT GGCAGGTGTA AATGTAGATC CAAGAACAGG TTCAATCACT ATTAGAGGAA CAAACAGCTA TAGCGGAGTA GGATCGCCTC TTGTAGTTAT TGATGGTTTT CCGCAGCCTA TAAATGATTT TTACTTTAGT AAAAGAGGCG TTTCGGGTTC TTCTATTTTA AGTTATCTTA ATCCGGATGA TATAGAAAGT ATTACTGTTT TAAAAGATGC CGCTGCAAGT TCGATCTGGG GTTCACGCGC CGCTAACGGA GTAATTGTAG TAACTACTAA AAAAGGCAAA AAAGCAGAAC CAACAATCAG TTTTACCACC ACGACTACAA TTGGTGAAAA AATAGATTTA GGAAAACTGC GCGTAATGAA TACAGCTCAA TATGTTGATT ACGAAAAAGA TTTAGTTGCA GGCGGATTTG TTTCAGACGA TATCAGCAAC TGGCAGGCTA AAAATCCTAG TGCTGCTCAG GAAATCATGT TCAGACAAAA AAGAGGCGAA ATTTCACTTA CCGAAAGAGA TCAGTTATTA AACCAATTAT CTCAAAATGA CAATCTGGGG CAAATCAATA AATATTTGTT AAGAAATTCA ATTACAACAC AATACGATTT ATCGGTAAGC GGCGGAAACG AGAAAAGCAC TTATTATTTG TCTTTAGGCT ATAATAAAGA TCAGGCAGCA ATGAGAGGAA ACGAATCTCA GTCTTATAAT ATTACCCTTA ATAACTCTTT TCAGCTAAAA AGCTTTTTAA AATTAAACAC AGGATTTAAT TACGTTTCTA CAAACTATCA GGTTAATAAT ACTGCAAACG AAGCATTATC AAATGTATCC AGTTTTGCAC TTCGTCCGTA TGATATGATT GCAGACGAAA ACGGAAATGG TCTTGATCGT TATATTATTT TCAGACCAGA AGTCGCAAAA GGATTTGAAG CAAAAGGATA TCTGCCTTGG TCTTACAATT ATTTAGATGA ATTAAACTAC TCTAATGTAG TAACAAAAGG CGCCAACATT CGATTAAATG CCAGTTTAAC CGCAACTGTT ACCAACTGGT TAAATTTTGA AGCATCTGGA ATGTATACTT CAATTGCAAA CAAAATCAAA TCGTTAAGTG AACTCGACAG TTATTTTGCA AGAAACATGA TTAACGAAGC CACATCTGTA AATACAGCAG GAAAATTAGT GTACGGTATT CCGGTGGGTT CGTATTTATA CAATACCACA TCAGGAAATG ATTCGCAAAG CATGCGTATT CAGATGAATA TCAATAAAAA TTTCAATGAC AATAACAGCC TGCACTTTTT AGCCGGTTCA GAAATTAGAG AAGAACGCAG AGAAGGTTCA AGCCAGAGAT TTTACGGATA CAATCTGGAT ACTAATTCTG GCCAGTCAGT AAACCCAACC GTTTATTATA CTACAATTTA TGGATGGCAG AATATCATTG GAACTTCAGA TAACAGCATC AGCAAATACA GAGACCGTTA TTTATCATAT TACGGACTAG GTTCTTATGA TTTTAAAAAC AGATACCATT TATCTTCAAG TATTCGTTTT GACGATTATA ACTTATTAGG AGCTTCAAGA AAAAACAGAG CGCTTCCATT ATGGTCTGTT GGTACAAAAT GGGATGTTAA TAAAGAATTT TTCCTTAGAA ATGTAACTTG GCTAAACGAC TTAGCATTCA GAATTACTTA CGGAAAAGCA GGAAGTGCAC CGGGAGGCGG TTTCGGCAGC CAGAGTGCTG TTATTGGCGT AGGTTCAGTA GATTTCAATA CCCAATTGCC AACAGCTTAT ATATCGGTTC CCGAAAATCC TGAGATCAAA TGGGAAACAA CATCAACCTT AAACTTTGGT TTAGATTATG CTGTTTTTAA TAATCGCTTA CGCGGAGGTG CCGATTTGTA CTATAAAAAA TCAAAAGATA TTTTAACCAA TCTGCCTTTT AACCCAACAA CAGGCTGGGG CTATTTAAAC TATAATACCG GAACACTTGA AGGACATGGA GTAGATTTAA ATATTGCCGG AACTATTATA AATGCCGCTT TTAAATGGAA CAGCAGTTTT AATATTTCAT ACAATACAAA TGAAGTTACA GATTCTCGTT TTACAGCCAC AACTACAAAT CAATACTTAT CTGGTGTAAC TACATTAGGT AAACCTATTG GATATCTGTA TGCTTATAAT TGGGCAGGAT TAGATGCAAA TGGTCAGTCT ACGGTTTATA AAAAAGACGG TACAGTTGTC AATGCAAATC AGGGAATTTC AACAATTGAT AAAGATGATT TAAAATACAT GGGAACTACG TTTGCTCCAT ATTTTGGAGG TTTTATGAAC GACTTCTCAT ATAAAAATTT CAGACTTGGA GTACAGATTA CCTATTATGC AGGTCACGTA TTTAGAAACA CAGTATTACA GAATTATCCT TCTTATACAG GAGTACAATA TGGTGCTGTT GCCAAAGACG AACTTATTGC AGACCGATGG AGACACGCCG GAGACGAAGC AACTACAAAT GTTCCTGGTT TAGCTAACAT TAGTTATAAT AGTTTGAATC GTTATCAAAA TGCAGACATC AACGTACTGC CGGCAGATAA CGTAAGATTA CAGCAGGTTT CATTAAGCTA TAATGTGCCA AGCCAATGGT TAGAAAAAAC TTTTATAAAG TCATTGAGTT TCAATTTGGC AGCGAGAAAT TTAGGATTAT TGTGGGTTAA GAATGATTTA GGCATCGATC CGCAGTACTT ATCAAATAAT AACTATAATA CATTGCCGCC GCAGCGTAAT TATACTTTAC AGTTTAATTG TAGTTTTTAA
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Protein sequence | MNKNHDIGLL LPKKIINLTF ILFMRVFILV LYLGLTSIYA NSAKAQNEIS VKVQGASLQT LFTTIQQKSD YVFFYNDDLL SSAKKVSLNQ YATVTEILDT ALSNTGLTYT IIDKQIVIKK SKKIQPVQQQ EYDITGTVTD KSGNPLIGVN VILVSNKSNW DITREKGEFR IRAAASDSLR FDYLGYKSKT VGINNKRVIN VILTPDVMEL TGVAVVASNG YTDIPKERVT GAFEVIGAKE LAEVPTVDIQ SRLEGKMAGV NVDPRTGSIT IRGTNSYSGV GSPLVVIDGF PQPINDFYFS KRGVSGSSIL SYLNPDDIES ITVLKDAAAS SIWGSRAANG VIVVTTKKGK KAEPTISFTT TTTIGEKIDL GKLRVMNTAQ YVDYEKDLVA GGFVSDDISN WQAKNPSAAQ EIMFRQKRGE ISLTERDQLL NQLSQNDNLG QINKYLLRNS ITTQYDLSVS GGNEKSTYYL SLGYNKDQAA MRGNESQSYN ITLNNSFQLK SFLKLNTGFN YVSTNYQVNN TANEALSNVS SFALRPYDMI ADENGNGLDR YIIFRPEVAK GFEAKGYLPW SYNYLDELNY SNVVTKGANI RLNASLTATV TNWLNFEASG MYTSIANKIK SLSELDSYFA RNMINEATSV NTAGKLVYGI PVGSYLYNTT SGNDSQSMRI QMNINKNFND NNSLHFLAGS EIREERREGS SQRFYGYNLD TNSGQSVNPT VYYTTIYGWQ NIIGTSDNSI SKYRDRYLSY YGLGSYDFKN RYHLSSSIRF DDYNLLGASR KNRALPLWSV GTKWDVNKEF FLRNVTWLND LAFRITYGKA GSAPGGGFGS QSAVIGVGSV DFNTQLPTAY ISVPENPEIK WETTSTLNFG LDYAVFNNRL RGGADLYYKK SKDILTNLPF NPTTGWGYLN YNTGTLEGHG VDLNIAGTII NAAFKWNSSF NISYNTNEVT DSRFTATTTN QYLSGVTTLG KPIGYLYAYN WAGLDANGQS TVYKKDGTVV NANQGISTID KDDLKYMGTT FAPYFGGFMN DFSYKNFRLG VQITYYAGHV FRNTVLQNYP SYTGVQYGAV AKDELIADRW RHAGDEATTN VPGLANISYN SLNRYQNADI NVLPADNVRL QQVSLSYNVP SQWLEKTFIK SLSFNLAARN LGLLWVKNDL GIDPQYLSNN NYNTLPPQRN YTLQFNCSF
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