Gene Fjoh_3913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3913 
Symbol 
ID5090144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4660052 
End bp4660768 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content34% 
IMG OID644743335 
Producthigh-affinity nickel-transporter 
Protein accessionYP_001196243 
Protein GI146301652 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3376] High-affinity nickel permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTGGAT TACTTATTAC CGTTTACGCC GGACTTGAAC ATGCTTTTGA GGCTGATCAT 
TTACTGGCAG TAAACAATCT TGTTACAAAT AGAACTAAAA TTAAAGATGC TTTAAAAGAC
GGAATGTTTT GGGGCGTTGG TCATACTGCC ACTATTTTTA TTGTGGGCGT TATTATGATT
GGTTTTAAAA TTTCGATAAG CGAAAATGTA TTCAGCTATC TTGAAGCGGT TGTTGGTTTA
ATGCTGATTG TTTTAGGAAT AATTCGTTTG TTTAAATTAT TATACAAAAA AAGGCATTCG
CATACGTATT ATCATAGTCA TGAACATACG CACAGCAACG GAGTCACGCA TACACACATG
CATGCTCATA CTTATTTTCA TTCGCATCCT ATTGCCTCTT TTAAACATGC TCATTATGAC
GGATCAACCA ATTATAAAAC GGCATTTGGC GTAGGATTGG TACATGGTTT GGCAGGAAGC
GGTTCATTGG TTATTTTGGT TATTTCGCAA ATGAAAACAC CATTGGAAGG TCTGCTTTAT
ATTTTGATTT TTGGAGTGGG ATCAATAATT GGAATGTTTA TCGCATCAGG ATTGTTTAGT
ATTCCATTTA CCAAAAGCAT TCTTAAATCT CAAAAACTCC AATATGCATT AATTATACTT
TCATCTGCAA TATGCATTAT ATTCGGATTT AAAATCATTT ATACCAATTT ACTTTAA
 
Protein sequence
MIGLLITVYA GLEHAFEADH LLAVNNLVTN RTKIKDALKD GMFWGVGHTA TIFIVGVIMI 
GFKISISENV FSYLEAVVGL MLIVLGIIRL FKLLYKKRHS HTYYHSHEHT HSNGVTHTHM
HAHTYFHSHP IASFKHAHYD GSTNYKTAFG VGLVHGLAGS GSLVILVISQ MKTPLEGLLY
ILIFGVGSII GMFIASGLFS IPFTKSILKS QKLQYALIIL SSAICIIFGF KIIYTNLL