Gene Fjoh_3881 details

Gene Information

• Locus tag: Fjoh_3881
• ID: 5093792
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: -
• Start bp: 4622382
• End bp: 4624322
• Gene Length: 1941 bp
• Protein Length: 646 aa
• Translation table: 11
• GC content: 39%
• IMG OID: 644743303
• Product: RagB/SusD domain-containing protein
• Protein accession: YP_001196211
• Protein GI: 146301620

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGAT ATATTTTTAG AAATTTAATA ATAGGATCTG TAGTTTTATA CTCCTTTGCC 
AGCTGTACTG ATATTCTGGA AGAAAAGCCG CATGATTTTT ATGAACCGGG TTATTTTAAA 
ACAGAACAGG GAGTAATACA AGGATTAACC TCTCATTATG CACACCTTCG TTATATTTAC 
GGACAGGCTT ATTTTTATAA TGCTACACAA ACAGGTACAG ATGAAGCAAC GTATGCGCAG 
AGTGCAGACG GAAATTTTAA AGATCATGAT TTATCGGGAG TTGGTGTAAT TAACCCTAAT 
TCAAGCCGTT CAGATGTTTT ATGGAACAAT TCATACAATG ATATCAACAC GGCCAGCGGT 
ATAATCGAGA ACGGAGCTGC TGTAGGAGTT TCAAGCAGTC TTATTGCCGA GTCAAAATTT 
TTCAGGGCTT TCGATTATTT CTTATTGGTT CAGACTTTTG GAGGTGTGCC ATTAGATTTA 
GGAGCTGGAG AATTGAAATT TAACAGTAAA CCTTCGAGAT CTTCAAAACG TAATACAGTT 
CCAGAAGTTT ATACAAAAGC TGTTTTTCCA GATTTAAAAG CAGCAGTTGC TGAACTGCCG 
GATGCTGCCC GATTAACAGG TACTGCAACC AAAACATTAG CTCGTTTAAT ATTGGCAAAA 
GCGTATTTGA CTTATGCATG GTGGCTGGAA AATCCAAATA ATATTCCAAC TTATCCTGAA 
GCACCGCGTA CAGATCCTGA CGGACATAAT GCACAATGGT ATTTTCAGCA GGCTTATGAT 
TTAGCCGTAG AAGGAATTAA TAATCCTGGT CCTTATGCCT TACTGGATTC TTTTTATGAT 
GTAAACGCAG GTCCAAATGA CAGAAACAAA GAAGTAATGT TATATGCAGA TCATACTGAA 
TCAAGCGAAT ATTACAATGG AGGAAGTCTT ACTTACGGAA GCGGCGGAGC TCCTGATAAC 
TTCGCAGGCT GGATGGTAAC CTGGAATTAC ACTTCTATTA GAAGTAAAAA CGGAAGCGCT 
TCGGTTTCTT CTGTTCAGCG TGAAGCCAAT CAGTTTTTAG GACGTCCATG GACAAGAATG 
GCGCCTCCAA TTGAAGTTTT TACCAAAACT TTTGCAGATA AAACAAATGA TTCAAGATAT 
GACGGAACTT TTGCAGCAGT TTACCGCGGT AACTGGAATT TGCAGGGAAC AGGTCTTACA 
ACTGTGCCGA CTTTAACCAA TGCAAACGGA TTAACGATTA AACCTGGCGA CGCTGTATTA 
ACTTTTTTAA ATGATGAACC ATTAACACCA ATTACTTATC CTTCTGGACA AGGAGACAGC 
GGTGTTGGAG CAGGAATTTT ACCGGGAAGA GCAGATTATG TTATTTCTCC AAACGGAATA 
AGCAGAATTG TATATCCAGG TTTCTGGAAA TTAGGACCAT ATCGTACCGA TAATGCGGGC 
GGATTAGGAC AACCTAATGC TGCAAGTACA AGACCTTACC CTGTAGCAAA ATTCTCTGAG 
TTGTATCTGG TTGCGGCAGA AGCTGCTGTT AAAGGTGCAA CAGGAACACT AAGTGCAAGA 
ACTCTTGTAA ATGTGATAAG AGCAAGAGCA GGAAAATGGC GCTGGGATAA TAACGGAAAT 
ACAGCAAAAA TAGCAGACAA CAGTGCGGCT ATGACTACTG CAACCCCGGC AATAATTGAT 
ATTAATTACA TTTTAGCGGA ACGTTCACGT GAGTTTTTTG GAGAAGGATA CCGCTGGTAT 
GATTTAGTAA GAACTCAAAA ATGGAATGAG ATTGCAGGAA AATATTCAAT TGGCGGATCT 
AACTATGGTC AGCATACACC TGAAGTTGTA ACCAGAACTA TTGATGCACA TCATTATTTA 
AGACCAATTC CTCAAGGACA GCTAGATGGT ATGGAAATGA GTGCAGATGA AAAAGCTAAA 
TATCAAAATC CGGGTTACTA G 

 

Protein sequence

MKRYIFRNLI IGSVVLYSFA SCTDILEEKP HDFYEPGYFK TEQGVIQGLT SHYAHLRYIY 
GQAYFYNATQ TGTDEATYAQ SADGNFKDHD LSGVGVINPN SSRSDVLWNN SYNDINTASG 
IIENGAAVGV SSSLIAESKF FRAFDYFLLV QTFGGVPLDL GAGELKFNSK PSRSSKRNTV 
PEVYTKAVFP DLKAAVAELP DAARLTGTAT KTLARLILAK AYLTYAWWLE NPNNIPTYPE 
APRTDPDGHN AQWYFQQAYD LAVEGINNPG PYALLDSFYD VNAGPNDRNK EVMLYADHTE 
SSEYYNGGSL TYGSGGAPDN FAGWMVTWNY TSIRSKNGSA SVSSVQREAN QFLGRPWTRM 
APPIEVFTKT FADKTNDSRY DGTFAAVYRG NWNLQGTGLT TVPTLTNANG LTIKPGDAVL 
TFLNDEPLTP ITYPSGQGDS GVGAGILPGR ADYVISPNGI SRIVYPGFWK LGPYRTDNAG 
GLGQPNAAST RPYPVAKFSE LYLVAAEAAV KGATGTLSAR TLVNVIRARA GKWRWDNNGN 
TAKIADNSAA MTTATPAIID INYILAERSR EFFGEGYRWY DLVRTQKWNE IAGKYSIGGS 
NYGQHTPEVV TRTIDAHHYL RPIPQGQLDG MEMSADEKAK YQNPGY