Gene Fjoh_3782 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3782 
Symbol 
ID5089591 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4484831 
End bp4485640 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content37% 
IMG OID644743204 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001196112 
Protein GI146301521 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAATA CTCAAACAAT AAATAGTAAT TACTTTATAA AAAAATATAG AATGGAAAAA 
TTAACAGATT ATTTTGGACA GAACATAAAA GATAAAAAAA TAGTGATAAC AGGAGGAACA
ACCGGAATAG GAAAAGCAAT TGCCGATGTA CTGGTATCAC TTGGCGGCAG GGTGCTGATT
TTTGGAAGAG ATGAGAAGGA TTTCAAAAAT GCCGTTGCAG ATATTCAAAA ACAATTTCCC
GGAAGCGAAG TTTACGGTAC TCCAGCAGAT GTCACTAAAA AAGAAGATAT TCAGAAAATC
TTAGAAATAG CAGACAATGA ACTCGGCGGC ATTGACATCC TCATCAACAA TGCGGCATTG
GGAGCTCCAG GAATAACTAA CGAAAGCTAT GATGATTATA AATATATTAT AGATACCAAT
ATTACCGGTT ATCTCGCATT TGCTCAGGAA GCAGCATCAA GGATGAAGCA GCAAAAATCA
GGACATATTA TCAATATCGG ATCGATGAGT GCAGAAAGTA AAGAAGCAAA AAGTACAATA
TATGTAGCAA CTAAATCTGC TATAAGAGGA TTCAGCACTT CGCTGCGAAA GGAATTAAAT
CCATTAGGAA TTAAAGTTTC ATTAATTGAA CCGGGAGCGG TGACAAGCGA CATGCAGCCC
GGAACCAATG CAGAACAGGA AGAGAAGATA GAAAAAATGG AGATGCTTGA AGCATACGAT
ATTGCAATGA GTACATTATT TTGTCTTTCC CAGCCCAAAA GATGTGATAT TGTAACAATG
CAGATCAGAC CTCATCTTCA GCTTATTTAA
 
Protein sequence
MRNTQTINSN YFIKKYRMEK LTDYFGQNIK DKKIVITGGT TGIGKAIADV LVSLGGRVLI 
FGRDEKDFKN AVADIQKQFP GSEVYGTPAD VTKKEDIQKI LEIADNELGG IDILINNAAL
GAPGITNESY DDYKYIIDTN ITGYLAFAQE AASRMKQQKS GHIINIGSMS AESKEAKSTI
YVATKSAIRG FSTSLRKELN PLGIKVSLIE PGAVTSDMQP GTNAEQEEKI EKMEMLEAYD
IAMSTLFCLS QPKRCDIVTM QIRPHLQLI