Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3782 |
Symbol | |
ID | 5089591 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 4484831 |
End bp | 4485640 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644743204 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001196112 |
Protein GI | 146301521 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCAATA CTCAAACAAT AAATAGTAAT TACTTTATAA AAAAATATAG AATGGAAAAA TTAACAGATT ATTTTGGACA GAACATAAAA GATAAAAAAA TAGTGATAAC AGGAGGAACA ACCGGAATAG GAAAAGCAAT TGCCGATGTA CTGGTATCAC TTGGCGGCAG GGTGCTGATT TTTGGAAGAG ATGAGAAGGA TTTCAAAAAT GCCGTTGCAG ATATTCAAAA ACAATTTCCC GGAAGCGAAG TTTACGGTAC TCCAGCAGAT GTCACTAAAA AAGAAGATAT TCAGAAAATC TTAGAAATAG CAGACAATGA ACTCGGCGGC ATTGACATCC TCATCAACAA TGCGGCATTG GGAGCTCCAG GAATAACTAA CGAAAGCTAT GATGATTATA AATATATTAT AGATACCAAT ATTACCGGTT ATCTCGCATT TGCTCAGGAA GCAGCATCAA GGATGAAGCA GCAAAAATCA GGACATATTA TCAATATCGG ATCGATGAGT GCAGAAAGTA AAGAAGCAAA AAGTACAATA TATGTAGCAA CTAAATCTGC TATAAGAGGA TTCAGCACTT CGCTGCGAAA GGAATTAAAT CCATTAGGAA TTAAAGTTTC ATTAATTGAA CCGGGAGCGG TGACAAGCGA CATGCAGCCC GGAACCAATG CAGAACAGGA AGAGAAGATA GAAAAAATGG AGATGCTTGA AGCATACGAT ATTGCAATGA GTACATTATT TTGTCTTTCC CAGCCCAAAA GATGTGATAT TGTAACAATG CAGATCAGAC CTCATCTTCA GCTTATTTAA
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Protein sequence | MRNTQTINSN YFIKKYRMEK LTDYFGQNIK DKKIVITGGT TGIGKAIADV LVSLGGRVLI FGRDEKDFKN AVADIQKQFP GSEVYGTPAD VTKKEDIQKI LEIADNELGG IDILINNAAL GAPGITNESY DDYKYIIDTN ITGYLAFAQE AASRMKQQKS GHIINIGSMS AESKEAKSTI YVATKSAIRG FSTSLRKELN PLGIKVSLIE PGAVTSDMQP GTNAEQEEKI EKMEMLEAYD IAMSTLFCLS QPKRCDIVTM QIRPHLQLI
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