| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3742 |
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| Symbol | |
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| ID | 5089776 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 4439982 |
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| End bp | 4440665 |
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| Gene Length | 684 bp |
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| Protein Length | 227 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644743166 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001196074 |
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| Protein GI | 146301483 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAACTA TTGTAATTGT TGGCGGCAGT AAAGGAATCG GTAATGGTGT TTTAGTGCAG
CAGCTGGAAA ATTATAAGGT AATCAATATC AGCAGAACAG CTCCCGATAT TACCCATCCA
AATTTAATTC ATTTTTCAGT TGATGTGCTC CGTGATGCTT TGCCTGAATT TGAAAGTATA
GATGCCCTGG TGTATTGTCC GGGGTCCATA AACCTCAAAC CCATTCTGGG CTTAAGCCTG
GATGATTTCA GAAAAGATTT TGAAATTAAC GTGATGGGTG CCGTCAAAGT GATTCAGCAT
TATCTGCCTG CGTTAAAGAA AGGCGAAAAA CCTTCTATTG TTTTATTCAG TACCGTTGCG
GCAAAGCTCG GAATGCCTTT TCACTCCAGT ATTGCAGCCT CTAAGGCAGC AGTGGAGGGT
CTGGTTAAAT CGCTCGGTGC TGAACTTGCC CCGTTAATTC GTATAAATGG TATTGCCCCG
ACTATTACAG AGACTTCTTT GTCGGAATCT ATTTTAAGAA ACGACCGTAT GAAAGAAAAT
ATGATCGAGC GCCACCCCTT GAAAAATTAC CTCAAGCCCG CAGAGGTGGC CCGCATGGCA
GGGTATCTTA TTTCTGAAGA TGCAGCATCA ATTTCAGGCC AGATTTTCGC GATGGATTAT
GGTTTGGTAA GCTTTAAATT GTAA
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| Protein sequence | MKTIVIVGGS KGIGNGVLVQ QLENYKVINI SRTAPDITHP NLIHFSVDVL RDALPEFESI
DALVYCPGSI NLKPILGLSL DDFRKDFEIN VMGAVKVIQH YLPALKKGEK PSIVLFSTVA
AKLGMPFHSS IAASKAAVEG LVKSLGAELA PLIRINGIAP TITETSLSES ILRNDRMKEN
MIERHPLKNY LKPAEVARMA GYLISEDAAS ISGQIFAMDY GLVSFKL
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