Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_3729 |
Symbol | |
ID | 5089764 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 4418909 |
End bp | 4424170 |
Gene Length | 5262 bp |
Protein Length | 1753 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 644743154 |
Product | YD repeat-/RHS repeat-containing protein |
Protein accession | YP_001196062 |
Protein GI | 146301471 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA GAATATTTAT ATTACTATTT CAAATAACTG CTTTTTTCAG TTATTCTCAG GATACAATAA TAAAGTCTGT AAAATCTAAT TTAAAAATTC AGGCTGTTGT TGATCCAGGA GGCGGGGATC CCACAGGATA TCCTTGGTTT AGAGATGCAG ATGGAGACGG GTACGGAAAT CCTGATGTAT CTGTTATAAA AAATACTAAA CCTAGCGGTT ACGTTTCTAA TAAGACAGAT CTCGATGATG GGAATAAATA CATTACAAAT ATACCTCCTC ATACTGTTTA TCAGGATAAA GATGGGGATG GGTTTGGAAA CTCAAGTGTA ATTTCATATG CGAGTACCAG TCGCCCCGGA TATGTTGACC AAGATGGTGA TTGTAATGAT AACGACGCTT CTATAAACCC GAACAATGTG TGGTATAGAG ATGCGGACGG CGATGGTTAT GGCTGGAGTT CTTCTTCAAT GAAAAGCTGC CTGCAGCCTT CAGGTTATGT TAAAAACGCC TCTGATTATG ATGATTCGAC AGGTAATATC ACCAATATCG CACCGCAGTA TTTTTTTCGT GATGCAGATC TTGATGGTTA TGGAAATCCA TCTAATTACG TCTATTACAG CAGTATGCCA AATGGATATG TAGCTAATAA TTTGGATTGT GACGATTTTG AATACTGGAT AAACCCTAAT ACGACTTGGT ATCTTGATGC AGATCGCGAT GGATATGGGG ATAGCAGACA GGTTATTGTT CAGTGTACAC AGCCGGCAGG CTATATACGT ACTGCGGGAG ATTATGATGA CTCAAATCGA AATATAACAA ATATACCGCC GCAGATTTTT TATTATGATG CAGATAAAGA CGGCTTTGGT AATCCGTCCA TAAGTGGATA TTTTAGTGTT CATCCTAATG ACTGGTCTTT CAATAATCTT GATTGTAATG ATAATGACCC GTCAATAAAC CCTTTAAATG TTTGGTATTA TGATGGTGAC GGTGATGGCT TTGGCTGGAA TGCTTTAAAA ATTCAGAGCT GTACTCCAGT AGCAGGTTAT GTAAGAAATA ATTCAGATTA CGATGATACG AATGCAGAGG TTACTGACCG CGCGCCGCAA TACTATTATC AAGATAAAGA TCGCGATGGT TATGGGGATC CATATGCGAG TGTGTATCGC AGTTATGCTC CTTCTAATTG GGTTTCCAAT GGAAATGATT GCAATGATAA CGACGCATCT ATAAACCCCA AGACAAGATG GTATCTTGAT CAGGATGGAG ATGGTTATGG AGAGCTCTAC ACTGGCGGCG TATTAAGTTG TTTACAACCT GCAGGGTATG TTAATAATGT CTTAGATTAC GATGATTCAA CAGTAAATAT TACCAATATA GCTCCCCAGT ATTTTTATCA GGATGCTGAT GGAGACGGGT ATGGAAATAA AAATAAAAGT GTTTATTACA GCGTGCCGCC TGCAGGCTAT GTGGCTAACA GTGCAGATTA CAGCGACACA GATATTTATA TAACTAATAT TGCACCTCAC ACCGTTTATA AAGATGGTGA CGGAGATGGT TTTGGATACG CATTGAACAT GTCTGCAGCA AGTGTTTCCA GACCGGGATA TGTAGATAAT AATACTGACT GCAACGATAA CGATGCCTCA ATTAATCCTA ACACAATATG GTATTTAGAT GATGATTTAG ATGGTTTAGG AGATCCTGCT AATTTTGTAC AGCAGTGTGG CATTCCAAAT GGAAACTATG TTTTAAATAA TTTAGACAAC TGTCCTCTTA TTACAGGAAC ATATTCAGAC TGCTCTGCCG TAACAACACC ATCAACAGAT CAGAATTATA TAATTACCAA AACCTATAAA CAGCCTTTAA CCGCTATAGT AGATTTTCCT GCAGCAGATC AGGCACAAAG CAGTATTACC TATTTTGACG GACTGGGCAG ACCCATACAG CAGATTTCAA ATAAACAATC TTCATCTGGA AGTGATATTA TTACGCATAT TGATTACGAT GATATTGGAA GGCAAATTCA GGAATATCTG CCTTATAAAT CACAAGGCAC AACAATGGCA TATGAAGAAA GTGCCAAAGA CAATACGATA ACTTTCTACA GTAATGATGC TTATGAAAAT ACCACTAATC CATTTTCTCA AAAAATGCTT GAATCTTCAC CTTTAAACAG AGTTTTAAAA CAGGCGGCAC CTGGAGCTTC ATGGGCTATG GATAGCGGTC ATGAGATTAA ATTAAGATAT GATACCAATA CAGATGGAGA AGTAAAATTA TATAAAGCAA ATACCTCGTG GAATGCCGAT TCTGGATTGT ATGAAATTAG TTTTCAGGAT TCGGGATCGT ATGTTAAAAA CGAATTGTAT AAAAATATAA CCTATGATGA AAATACAGGA AGCAGTCCTG TTGAATCTTC AGGGTCAACT GTAGAGTTTA AAAATAAAGA AGGACAAGTA GTTTTAAAAA GAACCTATAA TAATGGAGAA AAACACGATA CCCATTATGT TTATGATATT TACGGAAATT TAACCTATGT AATTCCTCCA AAAGCAGACG GTGTAATCAA TACAGATATT TTAAACGATT TATGTTACCA GTACAAATAT GATTACCGCA ATCGTTTAGT TGAGAAAAAA CTGCCGGGAA AACAGTGGGA GTTTATTGTC TACGATAAAC TTGATAAACC TGTTGCCACA GGTCCTGCAT TCTCTCCGTT TAAAGACGAC AGTTCAATAG GATGGATGAT TACTAAATAC GATGCTTTCG GACGTCCTGT TTACACCGGA TGGAGTAATC AGACCTGCAA TTCTGCAGCG AGAAAAGCAT TTCAGGATAC CAAAAATAAT GAAACAGTAT CATTTGAAAC CAAAGAGGCA TCAGGCTCTG TTGATGATAT ACAGGTATAT TACAGTAATG CGATTGAACC TAAAAATATT AAACTTTTAA CGGTTAACTA TTATGACAAT TATGCTTATC CAAACGCACC AGCAGTTCCT TCTGCAATAG AAGGCGATCC TGTTTTAAGT AATGTAAAAG GTTTGGCGAC AGGAAACTGG ACCAGAACTT TAACTACGGC TTCAAATAAA GATGGAGAAA TCAGTACAAC CTTATACGAT CTTAAAGCAC GACCAGTACG CACCTATATG CAAAACCATT TAGGAGGCTA TACTCAAACC GATGTTAAGC TCGATTTTAC AGGGAAAACT CTTTATAGTA TTTCAAAACA CAAAAGAACC TCAGGTGCTG CAGAATTAAC TGTAAAGGAA GAATTTGCAT ATTCTCCGCA GGATCGTCTG CTTACGCACA CGCATCAGAT AAACGGAGGT GCGGTAGAAC TTCTGGCTTC TAATACTTAT GATGATCTGG GACAGCTGAT AAGTAAAAAA ACAGGAAACA GCACCGGAAA TCCATTGCAG AAAGTGGATT ATAAATACAA CATTAGAGGC TGGCTCACGG CAATTAATCA AACAGGCAAT CTGCAGGCAG ATTTAGGTTT AACCGATTTA TTTGCTTTTA AAATTAATTA TGATAAACCA AGCAGTTCAG ATATAACAAG TTTATATAAC GGAAACATTT CTGAAACAGC ATGGCGTACC TCAAGTGATT TTTCACTGCG TTCGTATAGA TACGAATATG ATAAACTAAA CAGATTAACC TCTGCAGTAT ATGCAAAACC CGAAGATGCC ATACCAGTAT CTGGTGCTTA CAATGAAAGT TTAATGTATG ATAAAAATGG TAATATAAAA TTCTTAGAAA GATTTGGCGG CAGTGACGCG CCTTCGATAA CTTTTAAGAT TGATGATTTG ACATATTCTT ATCGAAATGA AAACTCAAAC CAGCTGATGA AAGTTACAGA AAATCCTGCT GGAAATGATA ATCAAGGGTT TAAAGACAAT AATAAAACCG GCGATGACTT TGATTATGAC GATAATGGAA ATATGATTCT GGACAAGAAT AAAAATATTA CATTAATAAC TTACAATCAT TTAAATCTTC CTAAAAAGAT TACATTTGGA ACAGGAAACT CAATTGAGTA TATTTACAAC GCAGCCGGAC AAAAACTTGG TAAAATTATC AATGAAGGAT CTCTTGCAGT CAAAACGGAT TATCTAGGCG GTTATCAATA TAAAGACAAC GTTCTTGAAT TTTTCCCTAC AGCAGAGGGA TATGTTAAAA ACACAAATGG TGCATTATCC TATGTGTTTC AGTACAAAGA CCATTTAGGC AATATACGTT TGAGTTATAC TAAAAATGCA CAAAACGGTC TTGAGATTAT TGACGAGACC CATTATTATC CATTTGGATT AAAACATGAG GGTTATGTTG CGCTGCAAGA AAGCAATAAT AAGTATAAGT ACAATGGCAA GGAGCTTCAA GACGAGCTGG GGCTTAACTT TTACGACTAT GGGGCACGTA ATTATGACCC TGCAATTGGT AGATGGATGA ACATTGACCC GTTAGCAGAA CAATCCAGAA GGTTTAGCCC TTATGCCTAC GCGTTAAACA ATCCCGTGTT CTTTATTGAT CCAGATGGGA TGAAAGCGCA AGCTGGACAG CATGGAAGTT ATTATGACTG GGATGAAGGC GGATATAGGA CTGCGGATGG AAAAGAAACA ACGTTCGAGT CTGCATTAGC AAGTCACGCC AACGATGATG ATTCAGGAAT CTCTCCATTT TCAACGGGAG ATTTATTTGC ATTAGCATCT AGTCATGGTG TTACAGATAA AATGAAAGCT GGTCAAGCTT TTGAAAGAGC CACTTTAGAT TATCTAAACC TTCCAAGTAA TGAAAAAAAA TTTGGAAGTT CAGATAGAAA GATAAAAACA GAAGGGCAAT ACAGTAATGT AATACCAGAT GCTGTATCTG ATATTAGTGT CTTTTCTCTA TTTGGTGAAG CAATAAATAA AGATAGTCAT TTTCATGAAG TGAAAGCGGT CACAGGCTGG TTAAACCTGG AATCGGGATC TTCTCCGTAT CAAATGTTAG GATTAATAGA CGCATCTGCA AATTCAACTG AAGGGGGCGT TCATGGTCGA TCAATTGTAA CCTTGTACAC TACTAGTAAT ACATTAATTT CACCAGCTTT AATAAAATAT GCTAATGATA AAAATGTTAC TCTTAAATGG TCAGTAGCAT ATATGAATAA TGGTTTGTTG TATTTCACTC CTCCAACAAC ATTATCATAT TCCGCGCAAC GAGCAACTGT GAAATTTCCA ATTGGGCTTC CTCAGCTTCA AGGCGTAGAA ATAAAATTTT AA
|
Protein sequence | MKKRIFILLF QITAFFSYSQ DTIIKSVKSN LKIQAVVDPG GGDPTGYPWF RDADGDGYGN PDVSVIKNTK PSGYVSNKTD LDDGNKYITN IPPHTVYQDK DGDGFGNSSV ISYASTSRPG YVDQDGDCND NDASINPNNV WYRDADGDGY GWSSSSMKSC LQPSGYVKNA SDYDDSTGNI TNIAPQYFFR DADLDGYGNP SNYVYYSSMP NGYVANNLDC DDFEYWINPN TTWYLDADRD GYGDSRQVIV QCTQPAGYIR TAGDYDDSNR NITNIPPQIF YYDADKDGFG NPSISGYFSV HPNDWSFNNL DCNDNDPSIN PLNVWYYDGD GDGFGWNALK IQSCTPVAGY VRNNSDYDDT NAEVTDRAPQ YYYQDKDRDG YGDPYASVYR SYAPSNWVSN GNDCNDNDAS INPKTRWYLD QDGDGYGELY TGGVLSCLQP AGYVNNVLDY DDSTVNITNI APQYFYQDAD GDGYGNKNKS VYYSVPPAGY VANSADYSDT DIYITNIAPH TVYKDGDGDG FGYALNMSAA SVSRPGYVDN NTDCNDNDAS INPNTIWYLD DDLDGLGDPA NFVQQCGIPN GNYVLNNLDN CPLITGTYSD CSAVTTPSTD QNYIITKTYK QPLTAIVDFP AADQAQSSIT YFDGLGRPIQ QISNKQSSSG SDIITHIDYD DIGRQIQEYL PYKSQGTTMA YEESAKDNTI TFYSNDAYEN TTNPFSQKML ESSPLNRVLK QAAPGASWAM DSGHEIKLRY DTNTDGEVKL YKANTSWNAD SGLYEISFQD SGSYVKNELY KNITYDENTG SSPVESSGST VEFKNKEGQV VLKRTYNNGE KHDTHYVYDI YGNLTYVIPP KADGVINTDI LNDLCYQYKY DYRNRLVEKK LPGKQWEFIV YDKLDKPVAT GPAFSPFKDD SSIGWMITKY DAFGRPVYTG WSNQTCNSAA RKAFQDTKNN ETVSFETKEA SGSVDDIQVY YSNAIEPKNI KLLTVNYYDN YAYPNAPAVP SAIEGDPVLS NVKGLATGNW TRTLTTASNK DGEISTTLYD LKARPVRTYM QNHLGGYTQT DVKLDFTGKT LYSISKHKRT SGAAELTVKE EFAYSPQDRL LTHTHQINGG AVELLASNTY DDLGQLISKK TGNSTGNPLQ KVDYKYNIRG WLTAINQTGN LQADLGLTDL FAFKINYDKP SSSDITSLYN GNISETAWRT SSDFSLRSYR YEYDKLNRLT SAVYAKPEDA IPVSGAYNES LMYDKNGNIK FLERFGGSDA PSITFKIDDL TYSYRNENSN QLMKVTENPA GNDNQGFKDN NKTGDDFDYD DNGNMILDKN KNITLITYNH LNLPKKITFG TGNSIEYIYN AAGQKLGKII NEGSLAVKTD YLGGYQYKDN VLEFFPTAEG YVKNTNGALS YVFQYKDHLG NIRLSYTKNA QNGLEIIDET HYYPFGLKHE GYVALQESNN KYKYNGKELQ DELGLNFYDY GARNYDPAIG RWMNIDPLAE QSRRFSPYAY ALNNPVFFID PDGMKAQAGQ HGSYYDWDEG GYRTADGKET TFESALASHA NDDDSGISPF STGDLFALAS SHGVTDKMKA GQAFERATLD YLNLPSNEKK FGSSDRKIKT EGQYSNVIPD AVSDISVFSL FGEAINKDSH FHEVKAVTGW LNLESGSSPY QMLGLIDASA NSTEGGVHGR SIVTLYTTSN TLISPALIKY ANDKNVTLKW SVAYMNNGLL YFTPPTTLSY SAQRATVKFP IGLPQLQGVE IKF
|
| |