Gene Fjoh_3642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3642 
Symbol 
ID5092566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp4335165 
End bp4336082 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content42% 
IMG OID644743067 
Productphage integrase family protein 
Protein accessionYP_001195975 
Protein GI146301384 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000185721 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CGATACAGAG CAGGGAATTT CTAAGGCTCA CAGTGGCATT CGGAGAATTT 
GTAAAAGTCA GGAATTACAA GCAGGGACGG TCAAACCTCT ATAAAAACAT CATAACGGAA
TTTCTGGTCT GGCTGGAACA GGCAGGAATC AGCAGAATCC AGAATGTGGC CTCAAAAGAA
TCTGTGAGGT ATCTGGATTA TCTTTCTTCA AGACCAAAGA AAAGAGGAAA CGGCATTCTG
GCTGAAAAGA CCATCAAACT GCATCTTTTT GTTCAGGGGC TTTTTCAGGT ATATCTGCTG
GAAAACAAAG AAATCCAAAA TGCCTATTAT ATCCCATCCA TCACTGGCGG AACGCAGAAA
CCCAGAAACA TTCTCACAAT AGAAGAAATA AAACTTGTTT ATCATCACGC TGAGAATGAA
ATGGAAAAAG CTCTGCTTTC CATTGCCTAC GGATGCGGAC TGAGAAGATC AGAGATTGCC
AGCCTTGATC TGAAAGATGT GAACCTGATA AAAGGAATGC TGGTTGTCAG GCAGGGTAAA
GGAAACAAGA GACGTGAAGT TCCCATGAGC GATACGGTTC TGCAGTACCT GACAAAATAT
GTCAGGGATG AGAGGCCTGA AAGGCTGACA GGGAGAAACC AGAATGAGGA AGCCTTTTTC
ATCAACAGCA GAGGCAGAAG ATCGACAGGA GAAAACCTAA ATGAGATATT AAACAAAATG
ATTGAGCAGA CTGGCAAATT TGAACTTGTC CAGAAAGAAA TCACGCTTCA CTGCCTGCGC
CACAGCATTG CCTTTCATCT TGCAGAGAAT AACGCGGGAA TTGACTTTAT ACGCAGTTTT
CTGGGGCATA CCCAGATAAA TACAACCTAC ATCTATGCGG TGCAGAATAA AAAACGCAAA
CCAGTCGTAA ACTTCTAA
 
Protein sequence
MKKTIQSREF LRLTVAFGEF VKVRNYKQGR SNLYKNIITE FLVWLEQAGI SRIQNVASKE 
SVRYLDYLSS RPKKRGNGIL AEKTIKLHLF VQGLFQVYLL ENKEIQNAYY IPSITGGTQK
PRNILTIEEI KLVYHHAENE MEKALLSIAY GCGLRRSEIA SLDLKDVNLI KGMLVVRQGK
GNKRREVPMS DTVLQYLTKY VRDERPERLT GRNQNEEAFF INSRGRRSTG ENLNEILNKM
IEQTGKFELV QKEITLHCLR HSIAFHLAEN NAGIDFIRSF LGHTQINTTY IYAVQNKKRK
PVVNF