Gene Fjoh_3611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3611 
Symbol 
ID5092535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand- 
Start bp4309411 
End bp4310070 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content32% 
IMG OID644743036 
ProductIS1 transposase 
Protein accessionYP_001195944 
Protein GI146301353 
COG category[L] Replication, recombination and repair 
COG ID[COG1662] Transposase and inactivated derivatives, IS1 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.533589 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAA AATGTAATTT TTGCAATGGT AAATGCATAA AAAATGGATT ACAATCTAAC 
GGAAATCAGC GTTATAAATG TTGTGCTTGC AAAAAAAGAC AGCAGATTGA ATATAGCTAC 
AACGCTTACA AAAAGGATAT CAATCAGGAA ATAGTGCTGT TCACCAGAGA AGGATTAGGA 
ATAAGAAGCA CGGCAAGAAT ATTGAAAATA TCAGCTACAA CATTACTAAA AAGAATTGTT 
TCAATTGCTA GAAACATTAC CAAGCCAATT ATCAGCAAAG GTAAAACTTA TGAAGTCGAT 
GAACTTTGCA CTTATATCAG ACACAAGAAA AATTATATCT GGCTGGTTTA TGCATTGGAA 
AAGAATTCTA GAACTGTTGT AAGTTTTAGC GTTGGAAAAC GAACCAATAA AACGCTGAAT 
CGTGTTTTGG AAACTTTAAA ATTATCAGAA GCTAAAAAGA TATTTACAGA CAGATTGAAA 
AATTATCGAT ATCTGCTTGA TCAGGAAATG CATTCTGTCA AGCGATTTGG GACAAATCAT 
ATTGAAAGAA AGAATCTGAC GCTGAGAACT CATCTGAAAA GACTCAACCG CAGGACAATC 
TGCTTCAGTA AAAGTTTGGT TATTTTTACT GCTGTTATGA AGATTTATTT TTGGTTTTGA
 
Protein sequence
MKIKCNFCNG KCIKNGLQSN GNQRYKCCAC KKRQQIEYSY NAYKKDINQE IVLFTREGLG 
IRSTARILKI SATTLLKRIV SIARNITKPI ISKGKTYEVD ELCTYIRHKK NYIWLVYALE 
KNSRTVVSFS VGKRTNKTLN RVLETLKLSE AKKIFTDRLK NYRYLLDQEM HSVKRFGTNH 
IERKNLTLRT HLKRLNRRTI CFSKSLVIFT AVMKIYFWF