| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3460 |
|---|
| Symbol | |
|---|
| ID | 5089661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 4126177 |
|---|
| End bp | 4126893 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 644742885 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001195793 |
|---|
| Protein GI | 146301202 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0108229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA CTAACAAAAG AATACTTTTA GTAGAAGATG ACCTAAATTT TGGGGCGGTT
CTTAAAGATT ATCTAATGTT AAATGACTTT GAAGTTACTT TAGCTAAAAA CGGTATGGAA
GGTTTCGAGA AATTCAAGAA AGATGTGTAT GATTTATGTA TTCTTGATGT AATGATGCCT
TATAAAGATG GTTATACTTT GGCTAAAGAA ATTAGAGAAA AAAATAGTGA AGTGCCTATT
ATATTTTTAA CAGCAAAATC TATGAAAGAA GATGTGTTAA AAGGATACAA AGCAGGTGCT
GATGATTATT TAAATAAACC TTTTGATTCA GAGGTTTTAT TAATGAAAAT TAAAGCAATC
ATTCAAAGAA AATCTGCTGA TACAAAAGCA GAACAAGTAC AATTTGAATT TAACATTGGT
AAATTCCACT TAAATTCAAA ATTAAGATTC TTGACTTTCC AGGATGAAGA GCCAATAAAA
TTATCTCCAA AAGAAAATGA ATTGCTTAAA ATGCTTATTC TTCATGAGAA TGATTTAATG
CCAAGAGAAT TAGCTTTAAC CAAAATTTGG AGAGATGACA ACTACTTTAC TTCAAGAAGT
ATGGACGTTT ACATCGCTAA ACTTAGAAAA TATCTAAAAT CTGACGAAGA TGTTGAAATC
TTAAACATTC ATGGAGAAGG TTTCAGATTA GTTGTAAAGA GCAAAGTTTC TGAATAA
|
|---|
| Protein sequence | MENTNKRILL VEDDLNFGAV LKDYLMLNDF EVTLAKNGME GFEKFKKDVY DLCILDVMMP
YKDGYTLAKE IREKNSEVPI IFLTAKSMKE DVLKGYKAGA DDYLNKPFDS EVLLMKIKAI
IQRKSADTKA EQVQFEFNIG KFHLNSKLRF LTFQDEEPIK LSPKENELLK MLILHENDLM
PRELALTKIW RDDNYFTSRS MDVYIAKLRK YLKSDEDVEI LNIHGEGFRL VVKSKVSE
|
|---|
| |