Gene Fjoh_3443 details

Gene Information

• Locus tag: Fjoh_3443
• Symbol: smpB
• ID: 5089644
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 4110999
• End bp: 4111454
• Gene Length: 456 bp
• Protein Length: 151 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 644742868
• Product: SsrA-binding protein
• Protein accession: YP_001195776
• Protein GI: 146301185
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTAAAAT CAGTCAATAT ACTTAATAAA AGAGCCCGGT TTGATTACGA AATAATCGAC 
ACCTATACTG CCGGAATTGT TTTGGCAGGA ACCGAAATTA AATCGATACG TTTAGGAAAA 
GCGAATATTA CAGAAAGCTT CTGCGAATTC AGCGGGATTG AACTTTTTGC AATCAATACT 
TATATAGAGG AATATTCATT TGGGAATCAA TTCAACCATA AATCAAGAAG TGAACGAAAA 
TTGCTTTTAA ATAAAAAAGA ATTAAAAAGC CTTCATAAAA GTGTTCAGGC AAAAGGTCTT 
ACCATTGTAC CTTTAAAATT GTTTACCAAT GAAAAAGGTC TTGCAAAATT GCAGATTGGT 
CTTTGTAAAG GAAAGAAAAA CTACGACAAA CGTGAATCTC TAAAAGAGCA GGATACAAAA 
CGCGACTTAG ACAGAATTAA AAAAGCATAT AACTAA 

 

Protein sequence

MLKSVNILNK RARFDYEIID TYTAGIVLAG TEIKSIRLGK ANITESFCEF SGIELFAINT 
YIEEYSFGNQ FNHKSRSERK LLLNKKELKS LHKSVQAKGL TIVPLKLFTN EKGLAKLQIG 
LCKGKKNYDK RESLKEQDTK RDLDRIKKAY N