Gene Fjoh_3230 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3230 
Symbol 
ID5093392 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3849597 
End bp3850691 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content33% 
IMG OID644742658 
Productsignal transduction histidine kinase, LytS 
Protein accessionYP_001195566 
Protein GI146300975 
COG category[T] Signal transduction mechanisms 
COG ID[COG3275] Putative regulator of cell autolysis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTCAA GTATTCAAAA TAAAATTACA GGAAAGAATT TTTTCTACAA ATACTATAGA 
ATTATAGTAA TTCCAGTGGT TTTTTTGGTG TATTTGTCAT CATACTATCT TTTAAATCCC
AACCAGAATT TCGAACAAGA TTCCTTAATA TCATTCGACA AGTCATTTGA CATCTTTATT
ATTCTGGTAT ACTGCGGTGT ATTGACAGAA TTAAGCCTTT TCGTAGGACG CAGTTTAAAT
CGGTTAATAC GCTGGGAACA TAATCCCATT TTTAGAGCAA TTGCTCAATT TATCTGCCTT
ATAGCCGGAA ATATTCTTTT AAACTTTATT TTTTCCCATT TGTGGAATTA CTTATATCCG
GGAGCCTGTT TAGAAGAAAA CGAACTGCTT ATTATTTGGC AGTCCAATAT CATGGCTGCA
ATACTATCAT TGTTTATCAG CTCTGTACAT ACCGGAATAT TTTTGCTTAA CCGCTGGCGT
TTAACATCAA ACGAAGCAGC CGAACTTAAA ATAAAAGCTT CAGAACTTCA GGAAGCCGTA
ACACGTTCGC AGTTAGAATC CTTAAAACTG CAGCTTGATC CGCATTTTAT ATTCAATAAT
TTCAGCACCT TAACAGAATT AATTCACGAA GACCAGCAGG CAGCAGCTTC ATTTTTAGAA
AATATTACAC GCGTTTACCG CTACATGATT TCGAACTTAG ATAAAGATAT TATCACAGTA
AGAGAAGAAA TAGAATTTTT AAATGCTTAT TTTTATTTGT TGAAGAAACG TTTAGGCGAA
AAAATCCAAT TAGAGTTAGA AGTAGACAGC GACTGCCTTG ATATGCATTT ACCGCCTTTA
TCACTGCAGT TATTGGTCGA AAATGCCGTA AAACACAACA TGGCGACTTT ATCAAGTCCG
TTGATTATTT CGATTTATTC TGAAGAAAAA AATATAATCG TAAAGAATAA TTTACAGCCA
ACATCGGGCA AAACTTTAGT GTCTACAGGC GTAGGACGTA AGAATATTGA GTTTAGATAT
AAAATTTTAT TCAACAAAAA ACCTGTTTTT TCACAATCGT TAGAAAGTTT TACAGTGCGT
TTACCATTAA TATAG
 
Protein sequence
MGSSIQNKIT GKNFFYKYYR IIVIPVVFLV YLSSYYLLNP NQNFEQDSLI SFDKSFDIFI 
ILVYCGVLTE LSLFVGRSLN RLIRWEHNPI FRAIAQFICL IAGNILLNFI FSHLWNYLYP
GACLEENELL IIWQSNIMAA ILSLFISSVH TGIFLLNRWR LTSNEAAELK IKASELQEAV
TRSQLESLKL QLDPHFIFNN FSTLTELIHE DQQAAASFLE NITRVYRYMI SNLDKDIITV
REEIEFLNAY FYLLKKRLGE KIQLELEVDS DCLDMHLPPL SLQLLVENAV KHNMATLSSP
LIISIYSEEK NIIVKNNLQP TSGKTLVSTG VGRKNIEFRY KILFNKKPVF SQSLESFTVR
LPLI