Gene Fjoh_3178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3178 
Symbol 
ID5093340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3784235 
End bp3785326 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content34% 
IMG OID644742606 
Producthypothetical protein 
Protein accessionYP_001195514 
Protein GI146300923 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACAGC AAAGCAAAAG AATTCCGGCA CTGGATTTAA TAAAAGGAAT GAGTGTTATA 
GGAATGATAA TTATACATAC ACTGCTGACA TTTGCAGATG TTAAATCACA ATCGGAAACC
GTTATTGGCA GTTTTATTGT TTTTCTGGGC AGAGGAACTT CTATTTTTCT AATCTGTATG
GGAATAACAT TTATGACTTC TCGTCATCAA AGTCTTTCTA GTTCTCTAAA ACGTGGCGGA
CTGCTTTTAG CGGCGGCTCT TTTTATGAAT TTCTTAAAAT TCATTTTTCC GGTAATTTTT
GGTTTTGCAC CAGATAATTT TATACAACGA TACGGATGGC ACGGACCAAT TGAACAGCAG
TATTTGTATT TAATGTTATT GGGCGACATA CTGCAATTAG CAGGAATGTC TTTGCTGTTC
ATTGGTTTTA TTCGAAAATA TGTTACCAAT AAATACGGAA TCTTAGCCAT AGGTCTATCA
ATCGCATTAG TTTCCAGAGA AGTCAGCGGC ATCAATTTAA ATTATCCCGT AATTAATTAT
GTATTAGATC TTCTTTTCAG TAATGATTTT CCGGCATACG TTTATTTTCC TGTTTTTCCA
TGGATGTCTT TTATTATCAT AGGAATGTTT TTTGGCAAAT GGTATCAGGA ACTTGATTAT
AACAGACCGC AATTGTTTAA GAGTATGCTG TATATCGGTA TTTTGTTTAC TTTATCAGGC
GCTCCTCTAG TTTTTATTTA TGGAGATTAC AATTACAATG GTTTTTACCA TATGGGTCCG
GGCGGTGTAC TTTATTTCGC AGGATGGACA TTAATCTTTT TATGGATTAT TTATAAAATA
TCAGTAAATA TTAGAGAAAA TAAGTTTGTT AGACTTTTAA AATACTGCAG CAAGAACCTC
ACTTCTATGT ATATGACACA ATGGATATTA ATTTCCTGGG GCAAAGGCAT CTTTGGTTTT
AGAGAAAATG GAATAACAAC GGTACTGGCA CTTATAGTAA TGTATATCGC CTTAACTTTT
TCTGTTCAGA TACTTTTGGA TTTATTGAAA AAAAAGAGCC AGAAATCAAA GCCTGTAGAA
GCTTTAAACT AA
 
Protein sequence
MEQQSKRIPA LDLIKGMSVI GMIIIHTLLT FADVKSQSET VIGSFIVFLG RGTSIFLICM 
GITFMTSRHQ SLSSSLKRGG LLLAAALFMN FLKFIFPVIF GFAPDNFIQR YGWHGPIEQQ
YLYLMLLGDI LQLAGMSLLF IGFIRKYVTN KYGILAIGLS IALVSREVSG INLNYPVINY
VLDLLFSNDF PAYVYFPVFP WMSFIIIGMF FGKWYQELDY NRPQLFKSML YIGILFTLSG
APLVFIYGDY NYNGFYHMGP GGVLYFAGWT LIFLWIIYKI SVNIRENKFV RLLKYCSKNL
TSMYMTQWIL ISWGKGIFGF RENGITTVLA LIVMYIALTF SVQILLDLLK KKSQKSKPVE
ALN