Gene Fjoh_3136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_3136 
Symbol 
ID5093132 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3725973 
End bp3726371 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content38% 
IMG OID644742564 
Productanti-sigma-factor antagonist 
Protein accessionYP_001195472 
Protein GI146300881 
COG category[T] Signal transduction mechanisms 
COG ID[COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) 
TIGRFAM ID[TIGR00377] anti-anti-sigma factor 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0981532 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGAA TTCCAATACT CAAGATGGGA GATTTTCTGC TGGTTACCAT ACAGGTTGAT 
TTGTATGACC AATTGGCTGA AAATCTTGAA TCTGATTTAA TAAATACTAT AAACAAGAAC
AATTCAAAGG GCGTTTTGAT TGATATATCA GCAGTTTCCA TTATCGATTC CTTTATGGGA
AGGATTTTGG GAAATATCGC CGTTATGTCA AAAATTATGG ATGCACAGAC AGTAGTGGTG
GGCATGCAGC CTGCGGTTGC TATTACACTG GTTGAACTTG GATTATCTTT AAACGGTGTT
ATTAGTGCTT TAAATGTTGA GAAAGGCATG GATTTGCTTC GCGCGAAAAT GTACAATGGC
GATAACGAGG AGCAGACGTA TGACGACAGC AACGAATAA
 
Protein sequence
MERIPILKMG DFLLVTIQVD LYDQLAENLE SDLINTINKN NSKGVLIDIS AVSIIDSFMG 
RILGNIAVMS KIMDAQTVVV GMQPAVAITL VELGLSLNGV ISALNVEKGM DLLRAKMYNG
DNEEQTYDDS NE