| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_3124 |
|---|
| Symbol | |
|---|
| ID | 5093120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 3706420 |
|---|
| End bp | 3708693 |
|---|
| Gene Length | 2274 bp |
|---|
| Protein Length | 757 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 644742552 |
|---|
| Product | putative alpha-1,2-mannosidase |
|---|
| Protein accession | YP_001195460 |
|---|
| Protein GI | 146300869 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3537] Putative alpha-1,2-mannosidase |
|---|
| TIGRFAM ID | [TIGR01180] alpha-1,2-mannosidase, putative |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAT ACAGTAAAAA TATACTTTTA GGAATATCAC TTTTGTTTGC GATAACTTCT
TATGCCCAAA AAACAGTTTA CCAATATGTA GATCCCATGA TTGGATCTGA AGGAGTCGGC
AGGGTTTTTA TCGGGCCTTC TTGTCCGTAC GGAATGGTAA AGCCAAGTCC TGATTGTACA
GTAAGTCCAA ACAGCGGATG GCTTCCAATG CCTAAAGAAG TTACAGGATT CAGTCAGGTG
CATGTGAGCG GAACAGGCGG CGGTCCAAAA TACGGGAACA TCTCAATTAT GCCATTTTCC
GGAGCTTTAG ACAAAATGGA TCAGACTTCT TTCAGAGCAG AAGAAAATGT AAAATTGGGT
TATTATGAAA CGGTTTTCAA AGAAAACAAT ATTAAAACCG AAATAACGAC TGGAGAAAAA
GTTTCATTTT ACAGAATAAC CTATCCAAAA GATAAATCAA AAGAATTAAA AATTGACCCT
GGATTTTTCC TTGGAGAAGA AAAGATTCCA GATGCCAGAG AAGCACAGCA GTTTGTAGGT
TCTCAGATCG AAATAGTTTC AGATACCGAA GTAAGAGGTT ACAGCCGAAT CAGGGGAGGA
TGGAATAACG GACGCGCTTA TACCGTTTAT TTTTGGGCCG TTTTCGATCA GCCTATTGCT
AAATATGTCA CTTTTAAAGA CGGCATGTTT TACAACAATC AAAAAGCACA GTTTGATTCA
GGAAAGAAAA CCGGAGCATT GCTTTCTTTT GGAAATTCAG GAAAAGAAGA ATTAAATGTC
AAAATAGGAA TTTCATTTTT GAGTGAATTA AAAGCCAAAA ATAATATAGA AATCGAAATC
CCGCATTGGA ATTTCAATAC CGTTTTAGTC GCTTTAGAAA ATAAATGGGA AGATTTATTA
AGCCGAATCA AATTATCGGA TGATACCTCG GTAGAGTACA GAAAAATGTT CTACACAGGT
TTGTACCACA CGATGATTAT GCCGGTTGAC AGAACGGGCG AAAACCCATT ATGGACCAAT
GATGAACCGT ATTACGATGA TTTTTATACC ATTTGGGACA CCTTTAGAAC CTCAAGTCCG
TTAATCACTT TAATTGATAG TAAACGAAAA GTAGATATTA TCAACGCGAT GCTGAATATC
TACAAACGCG AAGGCTATAT GCCCGAAGGA AGAAGCGGCA ATGATAACGG ACGAACTCAA
GGCGGATCTA ACGCTGAGGT TGTAATTGCC GATGCTTTTG TGAAAAATTT AAAAGGAATA
GATTACGAAC TGGCTTTACA GGCCATGATT AAAGATGCGA CAGTGCCTCC CGGAGGAAAT
GAAGAAAGAG AAGGAAGAGG CGGACTGATA GATTATCTGA AATTAGGTTA CGTTCCGTAC
GGCACAGACC GCGCAGGAAA CCGAACAATA GATTATTCAT ACAACGATTA TAACATTGCC
ACAGTAGCCA AAGGTTTGGG TAAAACAGAT TTGTACAATC AATACATCAA ACAGGCCGAG
AACTGGCAGA ATTTATGGCG TGCCGATTAT GAAAATAACG GTGCAAAAGG ATTTATTATG
CCAAAAGACA AAGATGGAAA CTGGCTGGAT GATGTCGTTT TCGGAGAATC CAAAATCCAA
AAACCAACTT TTAAATATAC GCCTGTCATT ATCGAATCAC CTTGGTATGT CTGTCATTGG
TGCGTATTTT TCTACGAAGG AACTTCTTGG GAATATTCAT TTAGTTTACC GCATGATATT
CCGGAATTGG TAAAAAAATC AGGAGGAGAA AAAGCATTCG AAAAACGATT AGATATATTC
TTCGATAATA ATTTATTTAA TGTTGCCAAC GAACCTTCAT TTCTTACACC TTGTTTGTAT
CATTGGATTG GAAAACCCTA TTTAAGCAGC GATAGAATCA GAACCATTAT CAAGGATAAT
TTCAATACAT CGAGAGAAGG TCTTCCCGGA AATGATGATT CTGGAGCGAT GTCTTCATGG
CTGGCTTTTC ATATGATGGG ATTATATCCA AATGCGGGAC AGCCTTATTA TCTAATCAAT
ACGCCTTTAA TTAAGGAAGT ATTTGTAAAA TTAGAGAATG GTAAAAGTTT TAAAATCACC
ACTAAAAAAA TGAGTGATAA AAACAGATAT ATTAAAACTG CTTTGCTAAA CGGAAAACCA
TACAACAAAG CATGGATTTT ACATGACGAT ATTAATAACG GAGGAGAACT GATTTTAGAA
ATGGATTCGA AACCTTCAGC TTGGGGAACA ACAATTTTAC CACCAGCAAA ATAA
|
|---|
| Protein sequence | MKIYSKNILL GISLLFAITS YAQKTVYQYV DPMIGSEGVG RVFIGPSCPY GMVKPSPDCT
VSPNSGWLPM PKEVTGFSQV HVSGTGGGPK YGNISIMPFS GALDKMDQTS FRAEENVKLG
YYETVFKENN IKTEITTGEK VSFYRITYPK DKSKELKIDP GFFLGEEKIP DAREAQQFVG
SQIEIVSDTE VRGYSRIRGG WNNGRAYTVY FWAVFDQPIA KYVTFKDGMF YNNQKAQFDS
GKKTGALLSF GNSGKEELNV KIGISFLSEL KAKNNIEIEI PHWNFNTVLV ALENKWEDLL
SRIKLSDDTS VEYRKMFYTG LYHTMIMPVD RTGENPLWTN DEPYYDDFYT IWDTFRTSSP
LITLIDSKRK VDIINAMLNI YKREGYMPEG RSGNDNGRTQ GGSNAEVVIA DAFVKNLKGI
DYELALQAMI KDATVPPGGN EEREGRGGLI DYLKLGYVPY GTDRAGNRTI DYSYNDYNIA
TVAKGLGKTD LYNQYIKQAE NWQNLWRADY ENNGAKGFIM PKDKDGNWLD DVVFGESKIQ
KPTFKYTPVI IESPWYVCHW CVFFYEGTSW EYSFSLPHDI PELVKKSGGE KAFEKRLDIF
FDNNLFNVAN EPSFLTPCLY HWIGKPYLSS DRIRTIIKDN FNTSREGLPG NDDSGAMSSW
LAFHMMGLYP NAGQPYYLIN TPLIKEVFVK LENGKSFKIT TKKMSDKNRY IKTALLNGKP
YNKAWILHDD INNGGELILE MDSKPSAWGT TILPPAK
|
|---|
| |