Gene Fjoh_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2727 
Symbol 
ID5090523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp3249279 
End bp3250124 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content34% 
IMG OID644742150 
ProductCof-like hydrolase 
Protein accessionYP_001195068 
Protein GI146300477 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATA TTAATATGAC AAAACTTAAA AATATAAAAG TTGTAGTAAG TGACCTTGAC 
GGAACTTTAC TTAACCCTCA ACACAAAATT TCAGATTACA CCAAATCAAT TTTTCAGGAA
CTTCACAATC AAAATTACCT TATAGTTGTT GCAACAGGCC GTCATCATCT CGATGCCATG
GCAATTATTG AAACGCTGGA AGTGCCGGTT TATTTAGTGA GTTCAAACGG AGCGAGAATT
CATTCACCAA ATAAAGAAGA ATTATTTGCT TTTAATTTAG ACAGCGATGT AGTAAAAGCA
GCATTAAATG TTGAAATTGA TCCGGCTATT ACGGTGGTTT TATTTAAAGA AAATGTTTGG
CAGACCAATA AATGGAATGA AAGACTTAAT TCTTTTCAGG CTGAATTAAA ATACCGTCCG
GAATTAGTTG ACTATAAAAA ACTGGAAGAT TTTGGAGCCA TTAAAATTTT CTTTTCATGT
GATGATCATG AGAAATTAGT AAAATTAAAA GATGACGTTC TGGCTAATTC ATCAGAACAT
CTGCATCATG CTTTTAGTCT GCCGACTTGT TTGGAATTTA TGGATAAATC TATAGATAAA
GCCGTTGCTA TTGAACAAGT ACTGGAAAAA GAAGGTTACA CTTTAGAACA AGCCGTTTCC
TTTGGAGATG GTTTTAACGA TGTTCAAATG TTGTCAGCGT CCGGAAAAGG TCTAATTATG
GGCAACGCCC CGGCTGTTTT AAAAGAAACA CTGCCGGATT TAGAAGTTAT TAAAACAAAT
GCCGAAGACG GCGTAGCAAA ATATATTGCT TCAAAAATAT TAGATAAAGA ATTAGCAGCA
AGCTGA
 
Protein sequence
MFDINMTKLK NIKVVVSDLD GTLLNPQHKI SDYTKSIFQE LHNQNYLIVV ATGRHHLDAM 
AIIETLEVPV YLVSSNGARI HSPNKEELFA FNLDSDVVKA ALNVEIDPAI TVVLFKENVW
QTNKWNERLN SFQAELKYRP ELVDYKKLED FGAIKIFFSC DDHEKLVKLK DDVLANSSEH
LHHAFSLPTC LEFMDKSIDK AVAIEQVLEK EGYTLEQAVS FGDGFNDVQM LSASGKGLIM
GNAPAVLKET LPDLEVIKTN AEDGVAKYIA SKILDKELAA S