Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2727 |
Symbol | |
ID | 5090523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3249279 |
End bp | 3250124 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644742150 |
Product | Cof-like hydrolase |
Protein accession | YP_001195068 |
Protein GI | 146300477 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTGATA TTAATATGAC AAAACTTAAA AATATAAAAG TTGTAGTAAG TGACCTTGAC GGAACTTTAC TTAACCCTCA ACACAAAATT TCAGATTACA CCAAATCAAT TTTTCAGGAA CTTCACAATC AAAATTACCT TATAGTTGTT GCAACAGGCC GTCATCATCT CGATGCCATG GCAATTATTG AAACGCTGGA AGTGCCGGTT TATTTAGTGA GTTCAAACGG AGCGAGAATT CATTCACCAA ATAAAGAAGA ATTATTTGCT TTTAATTTAG ACAGCGATGT AGTAAAAGCA GCATTAAATG TTGAAATTGA TCCGGCTATT ACGGTGGTTT TATTTAAAGA AAATGTTTGG CAGACCAATA AATGGAATGA AAGACTTAAT TCTTTTCAGG CTGAATTAAA ATACCGTCCG GAATTAGTTG ACTATAAAAA ACTGGAAGAT TTTGGAGCCA TTAAAATTTT CTTTTCATGT GATGATCATG AGAAATTAGT AAAATTAAAA GATGACGTTC TGGCTAATTC ATCAGAACAT CTGCATCATG CTTTTAGTCT GCCGACTTGT TTGGAATTTA TGGATAAATC TATAGATAAA GCCGTTGCTA TTGAACAAGT ACTGGAAAAA GAAGGTTACA CTTTAGAACA AGCCGTTTCC TTTGGAGATG GTTTTAACGA TGTTCAAATG TTGTCAGCGT CCGGAAAAGG TCTAATTATG GGCAACGCCC CGGCTGTTTT AAAAGAAACA CTGCCGGATT TAGAAGTTAT TAAAACAAAT GCCGAAGACG GCGTAGCAAA ATATATTGCT TCAAAAATAT TAGATAAAGA ATTAGCAGCA AGCTGA
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Protein sequence | MFDINMTKLK NIKVVVSDLD GTLLNPQHKI SDYTKSIFQE LHNQNYLIVV ATGRHHLDAM AIIETLEVPV YLVSSNGARI HSPNKEELFA FNLDSDVVKA ALNVEIDPAI TVVLFKENVW QTNKWNERLN SFQAELKYRP ELVDYKKLED FGAIKIFFSC DDHEKLVKLK DDVLANSSEH LHHAFSLPTC LEFMDKSIDK AVAIEQVLEK EGYTLEQAVS FGDGFNDVQM LSASGKGLIM GNAPAVLKET LPDLEVIKTN AEDGVAKYIA SKILDKELAA S
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