Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_2667 |
Symbol | |
ID | 5090242 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | + |
Start bp | 3171116 |
End bp | 3174574 |
Gene Length | 3459 bp |
Protein Length | 1152 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644742091 |
Product | YD repeat-containing protein |
Protein accession | YP_001195009 |
Protein GI | 146300418 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type [TIGR01643] YD repeat (two copies) |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.202168 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAA TAAACTACAA TTTAAAAGGC TTAATTAGTA TTTTTCTTTT TATGCTGATG TCCACGCTTA CTTATGGGCA GACAGAAAAT GATCCAAGTA AATTCGTTCC TAATATTATA CCGCCTTCAC CAACAGCTTA CGGATTAGGA ACATATGGCA ACACACCTGT TGGGTTGTTC ACAGGTTCTC AAAACATTAA TATTCCAATT TATACTTATA AAACAGCAAA TTTAGAAGTG CCTGTCAGCA TGTTTTATAG TTCGAATGGC GTTAAGGTTG ACGAAATATC ATCAAACATC GGGCAAAGCT GGAATTTAAG TTTTGGAGGA GTTATAACAA GAATAGTAAG AGATAAGCCG GATGAAGAGA GAGGAGAATA TCCTATTCCG ATCTCAATGA CAGAAGAGAT GGGCCGATAT TCGCCGCAAG CTCTTGAATT TTATCAATAT ATTGGAGAAA ATGATGTAGA TACAGAAGCC GATCTTTTTA GTTTTAATTT TGGAAAGTAT TCAGGCAAAT TTGTATTTGA CAATGATGGA GGTATAGTTT TAATGCCTGC TCAGGATTTT CAAATAAATT GTACTGTTTC TTCTGACGGT TTTGATTTTG TAATAACCAC ACCTGATGGG GTGAAGTACT TTTTTAATGA TAAGGAAATT ACTTCTCAAA GAGTTGTTGG ATCAGGACAT TCTATTCCCA TTACGACTAT ATCATCGTGG TATTTAAGCA AAATTGTTCA TCCAAAAGGT GACGTGATTC AGTTTTTTTA TAACAGCGAA GTTTCTAATT ACATAACTTC AAAATCGCAG ACTTTCAGAA TGTTATCCCC AAGAATACAA TATGATCAAG GTGGCAGTCT TGAAAATTTT TCACCTTCAT TAAGCTCAGT TTGTGATCAT ACAATTACTT TAAATGGAAA ATCAATAAAA TCGATAAAAA GCACCAACCC AGAATATGGA GAGATTTCAT TTACATATCT TTCTTCTGCA AGTGCTGATG TTACATCTGG AAATCGAAAA ATCGAAAAAA TAATTGTAAA AGATAAAACA GCAAAAGAAA TTGAAAATGT AGGTTTTACA TACACTACTA CAACAAATAA AAGGGTTTTT CTTGATAAGA TCCAATTTAA AGATATTAAT CAAAACTATC AATTCGAATA TGAGGATAGA AATAATCTGC CTCAAAGATT ATCATACAGC CAGGATCATT GGGGATATTT TAATGGAAAA AGTAATTTAA ACTTAGTTCC TAAAGGTATT ACTCTCTACG AATTTAGTAA TGTAAATTAT AATGGAGCAG ACAAAGAACC TGATTCAGAT TATGCAGTAA AAGGACTGCT GAAAAAAATT ACTTATCCAA CAAAAGGCTA TACTATTTTT GATTATGAGG CTAATACATA TTATGGAACT AAGCTGGTTT ATCCTCCTAA AACTTATAAA AGTTTAAATG TTGTTACTAC AGAACAAACT TATAGTGCCG TTAAAACAAC TAGTTTTATA AACCCTACTC CTCAAGACAT TTCATTAGTA GGCGGAGTAA GCTTTAACTG CTTAGACGCA AACTTAAATG TTGGCAAAAA TCAAGCATAT ATAAGTGTTT ATGACAACAC AACAAACAAA TATATTCCAC TAAAAAGATC AGACAATGAA AGTGTTGTCA GCAATGGTAA TATGTATACA ATAAGACCAA ATACAGAGCC GGAGGCAAAA AATCTTTTTT TTACTGCAGA ACTAAATCAC GAATATAAAC TGACTTTAGA GGCTGATTTC ACATGTACAT CATCTACTTT AAATTTTAAT TACTACCCAA CACCTCCAGT TGAATTAGCG TCAAATATTA AAACAGGAGG AATAAGAGTG GCACAGACTT TAGATTATTC TTTAAATAAA CCCGAGCCTG TAGTTAAAAA ATTTCTTTAT GCGAAAAAAG ATGACCTAAG CAAATCAAGC GGGAACAAAG GACAAGACCC TTATTATATT GATCGTTTTA GAGTCGATCG AATTATGGAA TCTCCAGTAG CAGGGATTTA TGGAGTCGTT ACCAGTAAAA CGTTAGTGAA TCTTTCTTCC AGTAGTCTTG TTTCTCTATT TGATACAGGA AATTCAAATG TTTTTTATCA ATATGTCACT ATTTCGTATG GGAATAATTT CTTAAATGGA GGTGAAGAGC ACGAATTTAT TGTACATCGT GATGCTCCTG ATGGATTTGT GTTTGGAAAT TATGAAGTTA GAAATGCACC TCTAAGTAAT TTGGGCTGGG ATAATGGTTT ATTAAAAAAA ATCGATTATT TCAATAAAGA GCTAAAGACA ATAAAAGAGA CAATTAATAT TTATGAAGAA AGATATGAGT TTAGAAAAGA AGTAAGATCG TTTAGTTCAA GGAAAAATTA TGAAAAGATT GCTTCTGCAT CGGTTAATTA TGTGTGTACT CAAGCGGATT TATCAAAGAG GACCAAATAT ATATCATGTG TTGCTGTGCA TAAACATGTT TATTCTGACA ATCTTGTAGA CAACTTAATT AAAGGTAAAA GCTATTATAC CTGTATTGCT CCCGGTAATG ATAATAAAAC AACTTTTATT GAACATCCTT GTTATGGAGT ACAATTGCCA AAAACAATTT CAAACCTGGA AAATATTGAT AACCTAAGTA TTGTATCTTA TAAAAATATA GGTTTTTGGT ATTACTTAAA ATCAAGTCAG GACATTACTT ATGATGTTAG TGGATCAAAT CCTATTTGTA ATACTGCAAT TTACAATTAC AATGGCATTA ATCATGTGCA ATTGTCATCA CAAACTAAAA CTAATTCTAA AAAAGAAACA ATAACTACTA AATATTTTAA TGCAAAAGAT GCCGAAATGT CTGGAAAACC ATTTGCAGCA GAATTGGCTG AAAAAAATAT TCTTTCCCCG CTAAACACAC AGACATTTAC AGGAAATAAT AAATTATCAG AACAGTTAAT AACTTACAAT AATTTATTAT TGCCAAATGC TGTGTATTCT GCTAAGTTTC CTAATGCAAA TAGTAATATC ACAGGTATAG GAAATCTCGA GAAAAAGATT GTTTTTAATC AATATGATGA TAGAGGTAAT ATACTCCAAT ATACACTAGA CGGCGGTGTT CCAACGGCAA TTATATGGGG GTACAATAAA ACACAGCCAA TTGCTAAAAT AGAAAATGCT TCTTATAGTG ATGTGCAGAA TTATGTTTCA AATCTCCAGA CTAAATCTGA TACGGGAACT GAAATTGACC TTCTTAGTAA TTTAAATAGT TTGAGAAATG CTTTATCAAA TGCCATGGTA ACAACTTACA CCTATTTGCC TATGATTGGA ATTAGTACAG TTACAGATCC AAAAGGAAAC ACAACAACTT ATTCTTATGA CGAATTTAAT CGTTTAAAAA CTATTAAAGA CGCACAGGGG CATGTAGTGT CTGAAAATCG ATATCATTTT AAAAACTAA
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Protein sequence | MFKINYNLKG LISIFLFMLM STLTYGQTEN DPSKFVPNII PPSPTAYGLG TYGNTPVGLF TGSQNINIPI YTYKTANLEV PVSMFYSSNG VKVDEISSNI GQSWNLSFGG VITRIVRDKP DEERGEYPIP ISMTEEMGRY SPQALEFYQY IGENDVDTEA DLFSFNFGKY SGKFVFDNDG GIVLMPAQDF QINCTVSSDG FDFVITTPDG VKYFFNDKEI TSQRVVGSGH SIPITTISSW YLSKIVHPKG DVIQFFYNSE VSNYITSKSQ TFRMLSPRIQ YDQGGSLENF SPSLSSVCDH TITLNGKSIK SIKSTNPEYG EISFTYLSSA SADVTSGNRK IEKIIVKDKT AKEIENVGFT YTTTTNKRVF LDKIQFKDIN QNYQFEYEDR NNLPQRLSYS QDHWGYFNGK SNLNLVPKGI TLYEFSNVNY NGADKEPDSD YAVKGLLKKI TYPTKGYTIF DYEANTYYGT KLVYPPKTYK SLNVVTTEQT YSAVKTTSFI NPTPQDISLV GGVSFNCLDA NLNVGKNQAY ISVYDNTTNK YIPLKRSDNE SVVSNGNMYT IRPNTEPEAK NLFFTAELNH EYKLTLEADF TCTSSTLNFN YYPTPPVELA SNIKTGGIRV AQTLDYSLNK PEPVVKKFLY AKKDDLSKSS GNKGQDPYYI DRFRVDRIME SPVAGIYGVV TSKTLVNLSS SSLVSLFDTG NSNVFYQYVT ISYGNNFLNG GEEHEFIVHR DAPDGFVFGN YEVRNAPLSN LGWDNGLLKK IDYFNKELKT IKETINIYEE RYEFRKEVRS FSSRKNYEKI ASASVNYVCT QADLSKRTKY ISCVAVHKHV YSDNLVDNLI KGKSYYTCIA PGNDNKTTFI EHPCYGVQLP KTISNLENID NLSIVSYKNI GFWYYLKSSQ DITYDVSGSN PICNTAIYNY NGINHVQLSS QTKTNSKKET ITTKYFNAKD AEMSGKPFAA ELAEKNILSP LNTQTFTGNN KLSEQLITYN NLLLPNAVYS AKFPNANSNI TGIGNLEKKI VFNQYDDRGN ILQYTLDGGV PTAIIWGYNK TQPIAKIENA SYSDVQNYVS NLQTKSDTGT EIDLLSNLNS LRNALSNAMV TTYTYLPMIG ISTVTDPKGN TTTYSYDEFN RLKTIKDAQG HVVSENRYHF KN
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