| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_2492 |
|---|
| Symbol | |
|---|
| ID | 5091946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | + |
|---|
| Start bp | 2978915 |
|---|
| End bp | 2981302 |
|---|
| Gene Length | 2388 bp |
|---|
| Protein Length | 795 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 644741920 |
|---|
| Product | TonB-dependent receptor |
|---|
| Protein accession | YP_001194838 |
|---|
| Protein GI | 146300247 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0237642 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT CAAATCTCCT TATCTTTTTA TTATTGCCTT TGTTTTGTTT AGCGCAGTCA
ACTTTAAAAT TAAAAGGGAA AGTGTCAAAT GAAACTGCAG GATTAGAATG GGCAGATGTT
TCTGTATTCA ATTCAGAAGG GAAAATTATT GATGGAACGA CAACCAAACA AGACGGAAGT
TTTGAAATCA ATCTTAAAAA AGGAACTTAT AAAATTACAA TCAGTCTTTT GGGATATTCA
GAATATGAAA AAGAAATTTC GATAGAAAAA GATACAGATT TAGGAATCAT TATTTTAAAA
GAAACCACAA CCAATTTGGG AGAAGTTGTA ATTCAAACCA AAAAGAAAAC GGTAGAACAA
AAGATAGATC GAGTTGTTTA CAATGTCGAA AATAATATTT CAGTAACTGG CGGAGATGCA
CTTACAGCTA TAAATACGGC TCCGGGCGTT GTGGTGCAGA ACAATGTTAT CAATATTTTA
GGAAAAGGCG CGTCGAGAGT CATGATCGAT GGCAGAATGA TTGAATTATC AGGCGAAGAA
TTAAATAGTT ATTTAAAATC TATTTCTGCC AATGATATTA AAAGTATCGA AGTTATTGCG
AATCCGCCGG CAAAATATGA AGCAAATGGA ACAGGCGGCA TCATCAATAT CATTTTGAAA
AAAGGAATCC GCGATTCATG GAAAAATGCG ACAACAATTT CTTACGACCA AAATAAGTAC
GGAATTTATA CTTTAAGAAA TAGCTTTTTC TACAACAAAA ACAAATTTAG ATTTGCTTTC
AGCGGAAATG GAAGAATTGG AAACACCAAT AATACAGAAG ATTTAGATAT TTATTATCCA
ACAGGGCTTT GGGAATTAAG AGACGTTTCT AAGCAAAAGG AAAACAGTAT TTCAGGACGT
TTTTCTTTAG ATTATGATGT TTCTGATAAA ACTACAATTG GTTTTCAGTA TTTAAACGAA
AGTTATAATC CTGATATGAA TTCGAATACA GTTATTTCCA TTTTTAACAA TTCTAATTCA
ATAGATTCTG TCCTTATAAA TAAAGGTTTT AATAATAAAT ATTCAGGAAG CCAGACTTAT
AACACACATT TGATTTCGAA ACTGGATTCT ATTGGCAGAA AAGTAAGCGT TGATGTGGAT
TATTTTACTT ACGACTCAAA ATTTGATAAA AATTTCACAG CCAAATCGTA TCTGCCAGAC
GGAACGTATC AAAATACGAA TCAGGCAGCA CGAAACAACT CAAATCAGAA TATTGATAAT
TTTAGTTTAA AAGCTGATTT TGAATACCCA ATGAAAGCTG TTAATTTGTC TTACGGAGGA
AAAGTAAGTT TTGTAAAAAG TAACAGCGAT GTGTTTTATT ACAATACCAT TTCGGGAAGC
GAAGTTCTGG ATCCCAATCA GTCGAATGTT TTTGAATACA AAGAAAATAA TCAGGCAGTT
TATTTGAATG GAAATAAAAA AATCAATGAT AAAATCTCTG TTCAGCTTGG TTTCCGATTA
GAAAATACAC AGACAAACGG TTATTCTGCA ACTTTAGATC AAGAAGTAAA AAATGATTAT
TTAAAACTGT TTCCGAGTTT GTATCTGGAT TATCAGCTGA ATGACAATCA TGGTTTTAAT
TTTACTTACG GAAAACGTAT TAACCGTCCG GGATTTGGAT TATTAAATCC GTTTCGATCT
TATATTAACA GTAACAGTTA TTCAGAAGGA AATCCGTTTT TAAGACCGTC TTTCAGTAAT
AATTTTGATT TTACATATTC GTTTAAAAAG AATTTAAGAA CTAATATTTT CTTTAATAAA
AATACTAATG GTTACGGTGT TGTTTTTACT TCAAATCCTG AAATCAATAC ACAGATTGTA
ACGAGAGAGA ATTATTTTGA CGAAAGTTCT TTTGGAATTG GTGAAAGCTA TTCGGCAGAA
GTTACAAACT GGTTTGAAAC ACAGACTTCG GTTTATCTTT TAGGTTCAAA AACTTCGTTT
ATTTCGAATA TAAATGCGGT TCCGTCAAAT AGTGCACAGG TTTATTTTAC AACCGAAAAT
TCTTTTTCAC TGAGTGAAAC TACAAAACTG CAATTGGAAT ATTTTTACAG TTCACCTTTC
AAAAAAGGTT TATATGAAAT TGGTTATATG GCGGGATTGA ATATTGCAAT TAGACAAAGT
TTCTTGAAAA ACAATCTGCA ATTGACTTTT TTGGTGAATG ATATTTTTAA TACTTCTTAT
TTAAAAGATT ATAAATCAAT TGTAAACGGA GTAGTGCAGG TTTACAGCCA AAATGAAAGC
AACCGATTTG TGAGATTATC TGCAACGTAT AATTTTGGAA ATAAGAAAAT TAAAGTTCAG
GAACGTGATT TTGGAAATAA AGAGGAGAAA AAACGAACAG GTAAGTAA
|
|---|
| Protein sequence | MKKSNLLIFL LLPLFCLAQS TLKLKGKVSN ETAGLEWADV SVFNSEGKII DGTTTKQDGS
FEINLKKGTY KITISLLGYS EYEKEISIEK DTDLGIIILK ETTTNLGEVV IQTKKKTVEQ
KIDRVVYNVE NNISVTGGDA LTAINTAPGV VVQNNVINIL GKGASRVMID GRMIELSGEE
LNSYLKSISA NDIKSIEVIA NPPAKYEANG TGGIINIILK KGIRDSWKNA TTISYDQNKY
GIYTLRNSFF YNKNKFRFAF SGNGRIGNTN NTEDLDIYYP TGLWELRDVS KQKENSISGR
FSLDYDVSDK TTIGFQYLNE SYNPDMNSNT VISIFNNSNS IDSVLINKGF NNKYSGSQTY
NTHLISKLDS IGRKVSVDVD YFTYDSKFDK NFTAKSYLPD GTYQNTNQAA RNNSNQNIDN
FSLKADFEYP MKAVNLSYGG KVSFVKSNSD VFYYNTISGS EVLDPNQSNV FEYKENNQAV
YLNGNKKIND KISVQLGFRL ENTQTNGYSA TLDQEVKNDY LKLFPSLYLD YQLNDNHGFN
FTYGKRINRP GFGLLNPFRS YINSNSYSEG NPFLRPSFSN NFDFTYSFKK NLRTNIFFNK
NTNGYGVVFT SNPEINTQIV TRENYFDESS FGIGESYSAE VTNWFETQTS VYLLGSKTSF
ISNINAVPSN SAQVYFTTEN SFSLSETTKL QLEYFYSSPF KKGLYEIGYM AGLNIAIRQS
FLKNNLQLTF LVNDIFNTSY LKDYKSIVNG VVQVYSQNES NRFVRLSATY NFGNKKIKVQ
ERDFGNKEEK KRTGK
|
|---|
| |