Gene Fjoh_2121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_2121 
Symbol 
ID5093882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2563667 
End bp2564938 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content35% 
IMG OID644741550 
Productmajor facilitator transporter 
Protein accessionYP_001194468 
Protein GI146299877 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2211] Na+/melibiose symporter and related transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACAG ATAATAAACC CTGGTTTTGG ATTCCGCTTC TTAACTTCGC ATCCGGACTG 
CCTTATGCCG TTATAATTTC CGTTTCGGTA ATTATGTACA AAAATCTCGG AATCTCAAAT
GAAGATATTG GAGTTTATAC CAGTTTATTA TATCTGCCGT GGGTTATCAA ACCGCTTTGG
AGTCCGTTTA TTGAATTAAC AGGAACCAAA AGAAAATGGT TTTTATCCAT GCAGCTGCTT
ATTTCAATAG CCTTTTTATT AGTTGGTTTT ACGATTCCAA CAAATGGATT TTTCGTAATG
ACTCTGGCTA TTTTCTGGGT TGCTGCTTTT GCTTCGGCTT CTAATGACAT TGCCAGCGAT
GGATTTTATT TATTGGTTTT ACCCGAAAAT CAGCAGTCTT TTTTCCTCGG AATCAGAAGT
ACTTTTTACA GACTTTCATT ATTAGCCGGA AACGGATTAA TTGTACTTTT TGCAGGATAT
CTGGAACACA AATACGGCGA TAATACTAAA GCATGGTCGT ATACTATGAT TGCAGTTGGT
TTGTTAATGA CATTTATTAC GATTTACAAT TTCATTTTTA CTCCAAAAAA TGAAATAAAC
GCTGTCGAAA AAAATAAAGA AACCCATCAT CAAAGTTTTG GAACTATATT TATAAGCTTC
TTTAAGAAAA AACAAATTGG TTTAATTCTG GCTTTTATTC TGGTTTTCAG ATTAGGAGAA
TCACAGCTGC TTAAAATGTT AAGTCCATTT TTATTAGATC CAAAAAAATT GGGCGGAATG
GCTTTAGATA CCGAAGCAGT TGGAATTATT TATGGAACCT GCGGTGTTGC AGCCTTAACC
ATTGGCGGTA TTTTAGGCGG AATTGCTATT TCCAGACATG GCCTTACGAA ATGGATGTTT
CCAATGTTTT TAACAATGCA TTTACCTATT ATTGGATTCA TTTTATTAGC ATTTTTTCAC
CCCGCATCAA TTTATTACAT TTATGCCGTC GTGATTTTAG AACAATTTGG TTATGGTTTT
GGATTTACTG CTTTTATGAT GTATTTAATT CATGTTGCCG AAGGAGAATC AAAAACAGCA
CATTATGCAC TGGCAACCGG TTTTATGGCT TTAGGAATGA TGCTTCCGGG AATGCTGAGC
GGTTATATTC AAAAATATTT AGGCTATGAC AACTTCTTTA TCTGGGTTCT TATAGCTACA
ATTCCAGGTC TTATTTTATC ACGTTTTTTA ACTTTCCCGA AAGATTTTGG GAAAAAATCT
GAAGAAGTTT AA
 
Protein sequence
MKTDNKPWFW IPLLNFASGL PYAVIISVSV IMYKNLGISN EDIGVYTSLL YLPWVIKPLW 
SPFIELTGTK RKWFLSMQLL ISIAFLLVGF TIPTNGFFVM TLAIFWVAAF ASASNDIASD
GFYLLVLPEN QQSFFLGIRS TFYRLSLLAG NGLIVLFAGY LEHKYGDNTK AWSYTMIAVG
LLMTFITIYN FIFTPKNEIN AVEKNKETHH QSFGTIFISF FKKKQIGLIL AFILVFRLGE
SQLLKMLSPF LLDPKKLGGM ALDTEAVGII YGTCGVAALT IGGILGGIAI SRHGLTKWMF
PMFLTMHLPI IGFILLAFFH PASIYYIYAV VILEQFGYGF GFTAFMMYLI HVAEGESKTA
HYALATGFMA LGMMLPGMLS GYIQKYLGYD NFFIWVLIAT IPGLILSRFL TFPKDFGKKS
EEV