Gene Fjoh_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1984 
Symbol 
ID5093558 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp2309749 
End bp2310768 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content33% 
IMG OID644741410 
Productproline-specific peptidase 
Protein accessionYP_001194335 
Protein GI146299744 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID[TIGR01250] proline-specific peptidases, Bacillus coagulans-type subfamily 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCAGTA TTATTGTCCT TTCCTCTCTT TTACTTTTAA CATCATGTAA AAATGAAAAC 
AATACCAATA TCTTATCAGA CTATTTTACA TATGACAAAG AAAAAGTAGA AACTGCCGGG
GTAAAAATGA TTCCAATAAA AACACCCGTT GGAGAATTTA AAGTCTGGAT AAAACGATTT
GGTACTAATC CAAAAATCAA AGTTTTATTA TTGCATGGAG GACCAGCAAT GACTCACGAA
TACATGGAAT GCTTTGAAAC ATTTTTCCAG CGTGAAGGAT TTGAGTTTTA CGAATATGAT
CAATTAGGAT CTTACTACAG CGACCAGCCA AAAGATAGCA GCTTATGGAC TATTGACCGA
TTTGTAGATG AAGTTGAACA AGTCCGCAAA GCAATAAATG CTGATAAAGA TAATTTTTAT
GTTCTTGGAA ATTCATGGGG AGGTATTCTT GCAATGGAAT ATGCATTGAA ATATCAACAA
AACATGAAAG GATTATTAGT TTCTAATATG ATGGCAAGTG CCCCAGAATA TGGAAAATAC
GCTGATGAAG TTCTGGCAAA ACAAATGAAA CCAGAAATTT TAAAGGAAAT TAGAGATTTG
GAAGCTAAAA AAGATTTTGA AAATCCACGT TATATGGAAT TATTGCTTCC AAATTTTTAT
AAAGAACATT TATGCAGATT AAATGAATGG CCAGACGGAT TAAATCGTGC CAGTAAACAT
GTAAATGGAG AAATTTATAC CTTAATGCAA GGTCCTAGTG AATTTGGTAT CAGCGGAAGA
TTAGCCAAAT GGGACATTAA AAACAGACTT CATGAAATTA CCATACCCAC CCTCATGATT
GGAGCAAAAT ACGACACAAT GGATCCAAAA GCAATGGAAG AACAAAGTAA ATTAGTCAAA
AAAGGCCGTT ATTTATACTG TCCAAATGGA AGTCATTTAG CAATGTGGGA CGATCAAAAA
GTGTTTATGA ACGGCGTTAT TCAGTTTATT AATGATGTAA ATGATGAAAA AGTCAATTAA
 
Protein sequence
MRSIIVLSSL LLLTSCKNEN NTNILSDYFT YDKEKVETAG VKMIPIKTPV GEFKVWIKRF 
GTNPKIKVLL LHGGPAMTHE YMECFETFFQ REGFEFYEYD QLGSYYSDQP KDSSLWTIDR
FVDEVEQVRK AINADKDNFY VLGNSWGGIL AMEYALKYQQ NMKGLLVSNM MASAPEYGKY
ADEVLAKQMK PEILKEIRDL EAKKDFENPR YMELLLPNFY KEHLCRLNEW PDGLNRASKH
VNGEIYTLMQ GPSEFGISGR LAKWDIKNRL HEITIPTLMI GAKYDTMDPK AMEEQSKLVK
KGRYLYCPNG SHLAMWDDQK VFMNGVIQFI NDVNDEKVN