Gene Fjoh_1553 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1553 
Symbol 
ID5092657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1794249 
End bp1795247 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content40% 
IMG OID644740960 
Productpyruvate dehydrogenase (acetyl-transferring) 
Protein accessionYP_001193904 
Protein GI146299313 
COG category[C] Energy production and conversion 
COG ID[COG1071] Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit 
TIGRFAM ID[TIGR03182] pyruvate dehydrogenase E1 component, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.796932 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAG TTACAAAAGA GGTATATTTA AAGTGGTATG AGGACATGCT GCTTTGGAGA 
AAGTTTGAAG ACAAACTTGC AGCATTATAC ATTCAACAAA AAGTTAGAGG TTTTCTACAC
TTATATAATG GTCAGGAAGC TGTATTAGCG GGTGCACTGC ACGCTATGGA CTTGACTAAA
GACAAAATGA TTACTGCTTA CAGAAACCAC GTTCAGCCAA TTGGTATGGG AGTTGATCCT
AGAAACGTAA TGGCTGAGCT TTTAGGAAAA GCAACTGGAA CTTCTAAAGG CATGGGAGGT
TCAATGCACA TTTTCTCTAA AGAACATGGT TTTTACGGTG GACACGGAAT CGTAGGAGCT
CAAATTCCTG TAGGAGCTGG TATTGCTTTT GCAGATAAAT ATTTCAATAC TGGCGGTGTT
ACCATGACTT ACTTTGGTGA CGGAGCTGCT AGACAAGGTT CTCTTCACGA AGCTTTCAAC
ATGGCTATGT TATGGAAACT TCCAGTTGTA TTTATCGTTG AAAACAATGG TTATGCAATG
GGAACTTCTG TAGAAAGAAC TGCAAACCAC ACTGACATCT GGAAATTAGG TTTAGGTTAC
GAAATGCCTT GCGGACCTGT TGACGGAATG AACCCTGTAA AAGTTGCTGA AGCAATGCAC
GAAGCTATCG AAAGAGCTCG CCGTGGAGAC GGACCAACTT TCCTTGAAAT GAAAACGTAC
CGTTACAGAG GACACTCTAT GTCTGATGCA CAATTATACC GTTCTAAAGA AGAGGTTGAA
GAGTACAAAA AAATCGACCC AATTACGCAG GTTCTTGACG TAATCTTGGA TCAAAAATAT
GCTACAGCAG AAGAAATTGA AGTAATTGAC CAAAGAGTTA AAGACTTAGT TGAAGAGTGT
GCGAAATTCG CTGAAGAATC TCCATACCCA GACTTACAAC AATTATACGA TGTAGTATAC
GCACAAGAAG ACTATCCATT TACACCTCAT AAATTATAA
 
Protein sequence
MKEVTKEVYL KWYEDMLLWR KFEDKLAALY IQQKVRGFLH LYNGQEAVLA GALHAMDLTK 
DKMITAYRNH VQPIGMGVDP RNVMAELLGK ATGTSKGMGG SMHIFSKEHG FYGGHGIVGA
QIPVGAGIAF ADKYFNTGGV TMTYFGDGAA RQGSLHEAFN MAMLWKLPVV FIVENNGYAM
GTSVERTANH TDIWKLGLGY EMPCGPVDGM NPVKVAEAMH EAIERARRGD GPTFLEMKTY
RYRGHSMSDA QLYRSKEEVE EYKKIDPITQ VLDVILDQKY ATAEEIEVID QRVKDLVEEC
AKFAEESPYP DLQQLYDVVY AQEDYPFTPH KL