| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1427 |
|---|
| Symbol | |
|---|
| ID | 5092433 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 1636837 |
|---|
| End bp | 1637952 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 644740834 |
|---|
| Product | lipid-A-disaccharide synthase |
|---|
| Protein accession | YP_001193778 |
|---|
| Protein GI | 146299187 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0763] Lipid A disaccharide synthetase |
|---|
| TIGRFAM ID | [TIGR00215] lipid-A-disaccharide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATACT ACATAATAGC CGGCGAGGCT TCTGGAGATT TACACGGTTC AAATTTAATG
AAAGCCTTAT ATGAGGAAGA TCCTCAGGCC GAAATTAGAT TTTGGGGTGG TGACTTAATG
CAGAAAGCCG GCGGAACTTT GGTAAAACAT TATCGCGATC TTGCATTTAT GGGTTTTGTT
GAAGTGCTTT TTAATTTAAA AACCATTTTA AACAATATAA AATTCTGCAA AAAAGATATC
TCTGAATTTA AACCTGATGT TTTAATTTTT ATTGATTATC CGGGCTTTAA TATGCGTATT
GCAAAATGGG CCAAAGAACT GAATTACAGA ACTCATTATT ATATTTCTCC TCAAATCTGG
GCCTGGAAAG AAAATCGCAT CAACGCCATA AAACAAGATG TTGACAGAAT GTTTGTAATT
CTGCCTTTTG AAAAAGGTTT TTATGAAGAC AAACATCATT TCCCTGTAGA TTTTGTTGGC
CATCCGCTAA TTGATGCTAT TCAAAATCAG CCAGCTTTTA ATGAAGCAGC TTTTAGAGAA
GAAAATAAAT TAGGAGAAAA ACCTATTATT GCTGTTTTAC CGGGAAGCCG TAAACAGGAA
ATTACCAAAA TGCTGAGCGT AATGTTAAGT GTTGTTGACG ATTTTCAGGA TTATGAATTT
GTTATTGCGG GCGCACCAAG TCAGGATTAC GAATTTTACC AGCAGTTTAT AAAAAACAAA
AACATCGCAT TTGTATCGAA TAAAACGTAT GATTTACTGC GTTCTTCAAC TGCAGCTTTA
GTTACTTCTG GAACAGCAAC TTTAGAAACA GCACTTTTTA AAGTTCCCGA AGTGGTTTGT
TACAAAGGAA GCGCTATTTC ATATCAAATT GCCAAACGAA TTATTACTTT AAAATATATT
TCGCTTGTTA ATTTAATTAT GGACCAGGAA GTTGTAACTG AATTAATTCA GGGCGAATGC
AATACAAAAC GCATCAAAGA AGAATTAAAC AAACTGCTTG AACCTTCTCA CCGTGAAAAA
CTGCTAAAAA ACTATGATAT TTTAGAACAA AAACTTGGTG GTGTAGGCGC AAGTAAAAAA
ACTGCAAAAC TTATTGTTGC CGATTTAAAA TCTTAA
|
|---|
| Protein sequence | MKYYIIAGEA SGDLHGSNLM KALYEEDPQA EIRFWGGDLM QKAGGTLVKH YRDLAFMGFV
EVLFNLKTIL NNIKFCKKDI SEFKPDVLIF IDYPGFNMRI AKWAKELNYR THYYISPQIW
AWKENRINAI KQDVDRMFVI LPFEKGFYED KHHFPVDFVG HPLIDAIQNQ PAFNEAAFRE
ENKLGEKPII AVLPGSRKQE ITKMLSVMLS VVDDFQDYEF VIAGAPSQDY EFYQQFIKNK
NIAFVSNKTY DLLRSSTAAL VTSGTATLET ALFKVPEVVC YKGSAISYQI AKRIITLKYI
SLVNLIMDQE VVTELIQGEC NTKRIKEELN KLLEPSHREK LLKNYDILEQ KLGGVGASKK
TAKLIVADLK S
|
|---|
| |