| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1404 |
|---|
| Symbol | |
|---|
| ID | 5093187 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Flavobacterium johnsoniae UW101 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009441 |
|---|
| Strand | - |
|---|
| Start bp | 1603168 |
|---|
| End bp | 1604199 |
|---|
| Gene Length | 1032 bp |
|---|
| Protein Length | 343 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 644740810 |
|---|
| Product | periplasmic binding protein/LacI transcriptional regulator |
|---|
| Protein accession | YP_001193755 |
|---|
| Protein GI | 146299164 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.00377783 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTA AAATAACCTT AAAACAAATC GCAAAGGAAC TTGACGTCTC TATCTCAACT
GTCTCAAAAT CACTCAGAAA CAGTCTTGAA ATTGGAGAAG AAACAAGACT AAAAGTTCAG
GCTTTTGCAA AGTTTTATAA CTATAAACCA AACAATATTG CCCTTAGTTT AAAAAACCGA
AAAACCAAAA GTATTGGTAT TATTATTCCG GAAATTGTAC ATTATTTTTT CTCTACTGTA
ATCAACGGAA TTGAACAGGT TGCGAACGAA TATGGTTACA GTGTTGTCAT TTGTGTATCG
GACGATTCTT TTGATAAAGA GGTGCTGAAT ATGGAGATGT TAGCCAACGG AAGTATTGAT
GGTTTTATCA TGTCTCTTTC TAAAGAAACC CAGTTTAAAG GCGACTTTCA CCATATAACA
GAAGTTATCA ATCAGGGAAT GCCGGTTGTA ATGTTTGACC GTGTTACGAA TGATATTTTA
TGTGATAAAG TAATTATTGA TGATAAATCG GCAGCGTATG AAGCCGTTCA GAGTTTAATT
GACAGCGGAC GCAAAAAAAT TGCACTTGTA ACAACTGTTG ATTATGTAAG TGTTGGAAAA
CTGCGAACAG ACGGTTACGA AAAAGCCTTA TTAGATAACG GATTACCTTT TAATGAGGAT
TTAATTATAA AAATCGAAGA TGTAGATACC TGCGAAATTA CCATAAGCCA GCTTTTGCAT
GATCGTGCCT TCGATGCTGT TTTTGCCGTA AACGAGCTTT TTGCAGTAAC GATTATTAAA
ACAGCCAATA AAATGGGATT AAAAGTTCCT GAAGATTTAG CTGTTATTGC TTTTACAGAC
GGAATTATTT CAAAATATTC AACTCCAACT ATCACCACAG TTAGTCAAAG CGGTGAAAAA
ATGGGCAATA AAGCAGCCAA AATGCTTATT GAACGTATAG AGGCGGAAGA AGATGAGGAT
GAAGAACATA CTGAAAATTA CATTACAGAA GTCATAGAAA CGCATCTCAT AAAAAGAGAA
TCTACTGACT AA
|
|---|
| Protein sequence | MKRKITLKQI AKELDVSIST VSKSLRNSLE IGEETRLKVQ AFAKFYNYKP NNIALSLKNR
KTKSIGIIIP EIVHYFFSTV INGIEQVANE YGYSVVICVS DDSFDKEVLN MEMLANGSID
GFIMSLSKET QFKGDFHHIT EVINQGMPVV MFDRVTNDIL CDKVIIDDKS AAYEAVQSLI
DSGRKKIALV TTVDYVSVGK LRTDGYEKAL LDNGLPFNED LIIKIEDVDT CEITISQLLH
DRAFDAVFAV NELFAVTIIK TANKMGLKVP EDLAVIAFTD GIISKYSTPT ITTVSQSGEK
MGNKAAKMLI ERIEAEEDED EEHTENYITE VIETHLIKRE STD
|
|---|
| |