Gene Fjoh_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1379 
Symbol 
ID5093162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1575541 
End bp1576644 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content32% 
IMG OID644740785 
Productglycosyl transferase family protein 
Protein accessionYP_001193730 
Protein GI146299139 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.500878 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTTG TGTTGTTTGC AATATTAACC ACTTATATTG TCAGCATTTC TTTGCTGATT 
TATGGTTTTG TCAAAGTAAA AAAATATCAA AAAACAGATT TAAAACCACA AACTAGTTTT
ACAATTATAG TTCCGTTTCG AAATGAAAAA GAAAACCTGC CCAATCTTTT AAACAGCATA
TCTAACTTAA ATTATCCAAC AGATTTATTT GATGTGATTT TGGTTGATGA TTCTTCAATT
GAAAAGTTTC AATTGTCAAT TGTTAATTAT CAATTGTCAA TTATTGATAA TATCCGTGTT
TCAAATTCTC CAAAAAAAGA TGCCATTACA ACAGCAATAC AGCACGTAAA AACAGATTGG
GTTATTACAA CCGATGCTGA TTGTATTGTT CCGGAAAACT GGCTTTTGAC GTTTGATAAT
TTTATTCAGG AAAATAAAAT TGCAATGCTT GCAGGAGCGG TTTCATACAA ATGTGAAAAT
TCTTTTTTAG ATCATTTTCA GCAATTAGAT TTAACAAGTT TGCAAGGTGC TACAATTGGT
AGTTTTGGTT TGAACAAAGG CTTTATGTGC AACGGGGCTA ATTTTGCCTA CAAAAAAACG
TTGTTTCAAA GCTTAAACGG TTTCGATGGA AATGACAAAA TTGCCAGCGG TGACGATGTT
TTTTTATTGC AGAAAGCAAT CGAAATGTTT CCAGATGAGG TGCATTATTT AAAAGCTCAT
GAGGCAATTG TACTAACAAA ACCTGCCGAA AACTGGAAAT CATTATTTCA TCAAAGAGTG
CGCTGGGCGG CAAAAACAAG TTCTTATAAA AGTACGTTTG GTAAATTTCT GGGAATAATT
GTATTCTTCG GAAACTTAAG TCTGGTAATT GCTTTTTTCT TGTTTATTTT CGGAATTATG
GGTTATCCAT TTTTGGTTTT ATCTGCTTTT TTAAAGTTTG CAGTCGATTT TGTTCTGCTT
TCCATCACCA ATAAATTTTT AACCAAAACC AGAATTAAAA GTCTTTTATT AAGCAGTTTG
TTTTATCCTT TTTTCAGTTC TGCTGTGGCT TTATATAGTT TGTTTGGTTC TTATGAATGG
AAAGACCGCA GGTTTAGAAG TTAA
 
Protein sequence
MIFVLFAILT TYIVSISLLI YGFVKVKKYQ KTDLKPQTSF TIIVPFRNEK ENLPNLLNSI 
SNLNYPTDLF DVILVDDSSI EKFQLSIVNY QLSIIDNIRV SNSPKKDAIT TAIQHVKTDW
VITTDADCIV PENWLLTFDN FIQENKIAML AGAVSYKCEN SFLDHFQQLD LTSLQGATIG
SFGLNKGFMC NGANFAYKKT LFQSLNGFDG NDKIASGDDV FLLQKAIEMF PDEVHYLKAH
EAIVLTKPAE NWKSLFHQRV RWAAKTSSYK STFGKFLGII VFFGNLSLVI AFFLFIFGIM
GYPFLVLSAF LKFAVDFVLL SITNKFLTKT RIKSLLLSSL FYPFFSSAVA LYSLFGSYEW
KDRRFRS