Gene Fjoh_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1329 
Symbol 
ID5092334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1519339 
End bp1521768 
Gene Length2430 bp 
Protein Length809 aa 
Translation table11 
GC content32% 
IMG OID644740732 
Producthypothetical protein 
Protein accessionYP_001193680 
Protein GI146299089 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTTA ACTGGTTTAA AATATTTATT TATCATTTAA AGCAAAGCAA ATTGTTTTCG 
TTTTTAAATG TTTTAGGATT GAGTATCGGG ATTTCGGGTG TGATTTTCGC TATTTTGTAC
TGGAATAATG AGCATGCATA CGATCAATGG AATTCTGAAA AAGAGAATGT ATATCAAGTG
CTGAACGGAA TGGGAAAAAC GGGCGATATA TGGACTACCA GCACAATTCC GTTTGGTATG
GCTTGTAAAG CAACTATTCC CGAAATAGAT CAAATTTGTT TTCTTAATGA TTGGTATAGT
CAGGGGGTAA TAAAATATCA GAACAAAAAA GTAATCGACA AAAAGATAAC TGTTTCTGAT
AATAACTTTT TCGATTTTTA TCCATTTCCA ATATTAAAAG GTGCCAAAAA AGACATCTTA
AAAGAAGAAA ACAGTGTTGC AATTTCTGAA GATCAGGAAA AACTGCTTTT TAAAAATAAT
GAGGATCCAA TAGGAAAATC CATTACTTAC GACAATAAGC CATACACCGT AAAAGCTGTT
TACAGAATTA TGCGCCCTTC TTCTGTTGAG CCAAATTATG TTTTTGGCGG TATTGTTCGT
GAGCATGATC TTACTCAATG GGGAAATTTC AGCTACGGGT TAATGATTAA GACCAAAAAA
GGTGTTGATC TTGCCACAGT TTCAAAGAAA ATGCATCATG TAAATTATGT AAACAGAACT
TTAAAGGATG CTAAAGAAAG CGGACAGCCT GTCGAACAAT ACATTAAAGA AAACGGAGAA
ATTAAAATTT ATCTTGATCA GTTAAAAACG CTGCATCTGC ATGGTACAAA ATCTTCCGGA
TCAGCCACTC CTGAAGGAAA AGGAAATTTA CAGCTTCTTT ATATAATGGC GGGTTTATCT
CTTTTAATTT TAGTTTTATC ATTGGTAAAC TACATTAATC TGGCTACGGC TTCTGCCATA
AAACGTGCTA AAGAAGTGGG AGTACGCAAA ATTGTGGGAG CTTCAAAAAA GCAGATTATT
GCACAGTTTA TATTTGAAAC GGCAATAATT GTAACCATTG CCATTTTGTT TGCTTTGGCC
ATTGTAGAAC TTTCATTACC CTATTACAAT ACCTTTTTAA GAAAAACTTT GACTATGAAT
GGCAGTGAAT TTTATCTGCA GCTCATTTTG ATTTTTGGAT TAGTAATCAT TCTTGCGGGT
ATATTCCCTG CCATTTATAT CTCAAATTTT GAGACGTTAA AAGTTTTAAA AGGTAATTTT
TCGAGAAGCA AAAGCGGTAT CTGGATTCGA AATTCGATGC TTATTTTTCA ATTCGGAATT
GCAGCATTTT TCATCATTGG TGCTTTAATT GTAAATTCTC AGGTAGATTT TATGATGAAT
AAAGACCTTG GTTTTAGCGG CGATCAGGTA ATACGAATTC CTTTTAACTA TCAGGATTAT
GATAAAAAAG GAGAAAAATA TCAAACTACA AAACAGGAAA TTCTTAAAAT GCCCGGAGTG
CAGCAGGTTT CTACTTTTGC AGGTACTTTT GGAAACAGTA CGAATTCGAG CTCAGGTTTT
ACGCATAACG GGGTTTCTGT TCAGCCTAGA AATGTTGAAA TGGATTTTGA TTTTCTGGAA
ATGATGAAAA TTAAAATTGT GCAAGGCCGT GATTTATCTC CAAAATTTGC CTCTGATACC
ATTGACAACT GGCTTATAAA CGAAACTTTA GCTAAAACTT TGGGCCTTAA AAACCCTATA
AATACTGTTA TTTCTTCGGG CTGGGGAAAT GAAAAAGGAA ATTTAAAATT TAAAGTAGTA
GGTGTTGTTA AAGATTTTCA TATTACCGGA CTGCAGAATA AAGTTCCGCC AATGGTTTTT
ATAAACTTAA AAACTTTAAA ATGGAATAAT TTTCAAAATG TATATTTAAA AGTTTCTCCA
AATAATTTAT CAGAAACTCT GGCAAAATTA AAAACTTATT GGGAGGCAAA CATAAACCCT
GATTATCCTT TTGATTACGA ATTTGTTAAC AAAGGATTTG CTAAAACTTA TGAAGAACAG
GTGAAACAAA AAAATCTGTT TTTTATCTTA AATTTAGTCG TAATTATAAT TGCTATCTTC
GGATTGTTTG CTTTGGCATC ATTTTCGATG GAGAGAAGAC TGAAAGAAAT TGCGATTAGA
AAAACCTTAG GAGCAGAAAC GGATATTTTA TTGAAAGAAT TATCCAGACA ATATATCATT
TTCTGCGGAA TGGGATTTTT AATTGGAATT GTTCCAGCAT ATATTTTATT GCAAAAATGG
CTGGAAGATT TTGCTTTTAG AGTCAATATT TCAATCGTTC CGTTTAGTAT TGCATTGGTT
TCGCTTTTAG TCCTTACATT GTTAATTGTA ATAACTAAAG CCTATCAGGT TACTAAAATC
GATGTTTTGA AATATTTAAA ATATGAATAA
 
Protein sequence
MIFNWFKIFI YHLKQSKLFS FLNVLGLSIG ISGVIFAILY WNNEHAYDQW NSEKENVYQV 
LNGMGKTGDI WTTSTIPFGM ACKATIPEID QICFLNDWYS QGVIKYQNKK VIDKKITVSD
NNFFDFYPFP ILKGAKKDIL KEENSVAISE DQEKLLFKNN EDPIGKSITY DNKPYTVKAV
YRIMRPSSVE PNYVFGGIVR EHDLTQWGNF SYGLMIKTKK GVDLATVSKK MHHVNYVNRT
LKDAKESGQP VEQYIKENGE IKIYLDQLKT LHLHGTKSSG SATPEGKGNL QLLYIMAGLS
LLILVLSLVN YINLATASAI KRAKEVGVRK IVGASKKQII AQFIFETAII VTIAILFALA
IVELSLPYYN TFLRKTLTMN GSEFYLQLIL IFGLVIILAG IFPAIYISNF ETLKVLKGNF
SRSKSGIWIR NSMLIFQFGI AAFFIIGALI VNSQVDFMMN KDLGFSGDQV IRIPFNYQDY
DKKGEKYQTT KQEILKMPGV QQVSTFAGTF GNSTNSSSGF THNGVSVQPR NVEMDFDFLE
MMKIKIVQGR DLSPKFASDT IDNWLINETL AKTLGLKNPI NTVISSGWGN EKGNLKFKVV
GVVKDFHITG LQNKVPPMVF INLKTLKWNN FQNVYLKVSP NNLSETLAKL KTYWEANINP
DYPFDYEFVN KGFAKTYEEQ VKQKNLFFIL NLVVIIIAIF GLFALASFSM ERRLKEIAIR
KTLGAETDIL LKELSRQYII FCGMGFLIGI VPAYILLQKW LEDFAFRVNI SIVPFSIALV
SLLVLTLLIV ITKAYQVTKI DVLKYLKYE