| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_1310 |
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| Symbol | |
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| ID | 5094014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 1494634 |
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| End bp | 1499166 |
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| Gene Length | 4533 bp |
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| Protein Length | 1510 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644740713 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001193661 |
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| Protein GI | 146299070 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATTTAA TATTCGATAC CGAAACAACC GGATTACCAA AACGCTGGGA TGCCCCGATA
ACCGATTCTG ATAACTGGCC TCGCTGTATA CAAATTGCGT GGCAGCTTCA TGACGAAATG
GGACAGCTTA TTGAGCATCA GGATTATTTG GTAAAACCAG AAGGATTTAA TATTCCGTAT
GATGCCGAGC GTATTCACGG AATCTCAACT GAATTGGCTG AAGCCGATGG AATCACTTTG
GCCGAAGTTC TGGAGAAATT CAATATTGCT TTAAGCAAAA CTAAATTTAT CGTTGGACAA
AATTTAGGTT TCGACGTTAA TATTATGGGA GCTGAATTCC ATAGAATGGG AGTGGAGTCT
CAAATGGCTT CAATGCCTGT TTTGGATACT TGTACCGAAG TTACGGCTTC GTTATTACAG
CTTCCTGGAG GTCGTGGAGG AAAATTCAAA TTGCCGACTC TGACCGAATT ACACAGCTAT
CTTTTCGATC AGCCTTTCGC GGAAGCGCAC AATGCAACTG CCGACGTTGA GGCAACTACG
CGTTGTTTCT TGGAATTGGT TAGAAGAGAG GTTTTTACAA AAGAAGAATT AGACGTTCCG
AAGGAATATT TCAAAGAATT TCAAGAAAGA AATGCTGAGC CATTTAAGTT AATTGGTTTA
AAACACATTA ATTTAAAAGC TGCTTCAGAT AAAATCAGGG AACAGCTTAA AGCTTTAGCT
GGAGAAGGGC AGCAGACCGT TGTTTCAGAA GAAGATAAAG CTGATTTCAA AGCAGCAAAA
TTTGCGCATT TACACAATCA TACGCAGTTT TCGGTACTTC AATCTACTAT CGGAATTGGA
AATATTGTAG CAGCAACAGC TAAAAACGGA ATGCCTGCCG TAGCGATGAC TGATACTGGA
AACATGATGG GAGCTTTCCA TTTTGTGAGT GCCGTAATGA ATCATAACAA AGCAGCATCT
GGAAAAAACA AAGCTTTGGT TGAAGCAGGA GAAGAACCAA CAGAAACCGA AATAAAACCA
ATTGTAGGCT GTGAATTTAA TATCTGCGAA AATCATTTAG ATAAAAGTAA AAAAGACAAC
GGTTATCAGG TTGTATTACT GGCCAAAAAC AAAGCGGGTT ACCACAACTT AGCTAAAATG
GCTTCGATTG CTTATACTGA AGGATTTTAT TATGTACCGA GAATCGACAA AAACATCGTC
GAAAAATACA AAGGCGATAT TATGGTTTTG TCTGGGAATT TATACGGAGA AATTCCGAGT
AAAATCCTAA ACATCGGTGA AAACCAAGCC GAAGAAGCAT TGATTTGGTG GAAAGAACAA
TTTGGCGAAG ACTTCTATCT GGAAGTTATG CGTCATAATC AGGAAGATGA AAATCGTGTC
AACAAAACCC TGATTGAATT TTCGCAAAAA CACAATGTCA AATTAATTGC GACAAACAAT
ACGTATTACT TAAATAAAGA AGATGCAAAT GCGCATGATA TTTTACTTTG TGTAAAAGAC
GGTGAAAAGC AGGCAACACC TATTGGACGT GGACGCGGTT ACCGCTACGG ACTTCCAAAT
CAGGAATATT ATTTCAAGTC GGAAGCAGAG ATGAAAAAGC TCTTCGCCGA TTTACCCGAA
GCCATTATCA ATATTCAGGA AGTTATTGAT AAGGTTGAAG GGTATTCACT TTATCGTGAT
GTATTGCTTC CTAAATTCGA AATCCCTGAC GAATTTATGG TTCCTGAAGA TGAAGAAGAT
GGTGGTGTAA GAGGGGAAAA TAAATACTTG CGACACCTTA CGATGGAAGG TGCGAAAAGA
AGATACGGCG AAATTACCGA ATCAATTCAG GAGCGTTTGG ATTTTGAATT AATGACGATT
TCGAATTCAG GATATCCGGG TTATTTCCTA ATTGTACAGG ATTTCATCGC CGAGGCAAGA
AAAATGGACG TATCGGTAGG TCCTGGGCGT GGATCTGCAG CGGGTTCTGC CGTTGCTTAC
TGTCTGGGGA TTACAAATAT TGACCCTATT AAGTACGATT TGCTTTTTGA GCGTTTCCTA
AATCCTGACC GTGTATCGAT GCCCGATATT GATATCGACT TTGATGACGA GGGTCGTGGA
CGTGTAATGG ATTATGTAAT CAACAAATAC GGTCAAAAAC AGGTAGCACA GATTATCACT
TATGGTAAAA TGGCGACTAA ATCGGCGATT CGTGATACGG CGCGTGTATT GGATTTACCT
TTATTTGAAG CCGATAGAAT TGCGAAACTG ATTCCGGGAA TGATGCCGTC AAAATGGAAT
TTAGCGCGTT TTATTTCGGA GAGTGAAGAG GAAGTTAAAA AAGCGCTTCG TTCTGACGAA
TTTGATAATG TAAAAGAATT AATCGCGATT GCCAATGAAG ATGATTTAGC AGGAGAAACC
ATTCAGCAGG CAAAAATTCT GGAAGGATCG ATGCGTAACA CGGGAATTCA CGCGTGCGGG
GTAATCATTA CACCGTCGGA TATTACGAAT TACGTACCTG TAACAACTGC AAAAGATTCA
GATTTATATG TAACACAGTT CGATAACTCG GTTGCAGAAA GTGCCGGATT GCTTAAAATG
GACTTCTTGG GTCTGAAGAC CCTTACGCTG ATAAAAGATA CCGTAAAACT GGTAAAATAC
AGAACAGGAA TTGATCTCGA TCCAGATAAT TTCCCGATTG ATGATGAAGA AACGTATGCG
CTTTTCCAAA GAGGTGAAAC TGTTGGAATC TTCCAATATG AGTCACCCGG GATGCAGAAA
TACATGAAAG ATCTGAAGCC GACGGTTTTT GGAGATTTAA TTGCCATGAA CGCCTTGTAT
CGTCCGGGAC CTTTGGAGTA TATTCCATCT TTCGTTCGAA GAAAAAACGG TGATGAAGAA
ATCAAATACG ATTTAGATGC CTGTGCCGAA TATTTATCAG AAACGTACGG AATTACAGTT
TACCAAGAGC AGGTAATGCT TTTGTCTCAG TCTTTGGCAG GATTTACAAA GGGTGAGGCC
GACGTCTTGC GTAAAGCGAT GGGTAAAAAG CAAAAAGACG TACTGGATAA AATGAAGCCC
AAGTTTGTTG AACAAGCAGC ACAAAAAGGA CATGACGCCA AGATTTTGGA GAAAATCTGG
AAAGACTGGG AAGCCTTTGC GAGTTACGCC TTCAACAAAT CGCACTCGAC TTGTTATGCC
TGGATTGCGT ACCAAACTGC TTATTTGAAA GCGCATTACC CTGCTGAATA TATGGCGGCG
GTACTTTCGA ATAACATGAA CGATATCAAA CAAGTTTCTT TCTTCATGGA AGAATGTAAA
CGTATGGGAT TACAGGTTCT TGGGCCTGAC GTAAACGAAT CGTACTATAA ATTTACTGTA
AACGATGACT ACGCAGTTCG TTTCGGAATG GGAGCTATCA AAGGTGTGGG TTCCGGAGCT
GTAGAAACAA TTGTAGAAAA CAGAAAAGAC GGAAGATATA AATCGATTTT TGATTTGGCG
AAACGAATTG ATTTGCGTGC CGCCAATAAA AAAGCGATTG AAAACTTAGC GCTTGCCGGA
GGTTTCGATT CATTTGAAGG AACAACCAGA GCGCAGTATT TCCACGACGA TGGTGACGGA
ATTACATTCT ACGAAAAAGC GATGCGTTAT GGATCGAAGT TTCAGGAAAA TGAAAACTCA
TCCCAAGTAA GTTTATTTGG AGAAGCCAGC GAAGTACAAA TCGCAGAACC AGTTGTGCCT
CCATGTGAAG ACTGGAGTAC GATGGAAAAA CTGGCAAAAG AAAAAGAGGT TGTTGGAATT
TATATTTCTG GACATCCGCT GGATGATTTT AGATTTGAGA TGAAATACTT CTGTAATGCT
CGTTTAGAAG CATTAAAAAG CATGAATGAA TATGTAGGTA AAAATCTAAA TTTTGCCGGA
ATTATCAACA ACGTACAGCA TCGTGTGGCT AAGAATGGAA AAGGCTGGGC CGCTTTCAAC
TTAGAAGGAT ATGATGAAAG TTATGAGTTT AAGATTTTTG GTGAAGAATA CCTGAAATTC
CGCCATTTCT TAATTCAGAA CAATTTTGCC TTTTTGAAAA TATTAATCAA AGACGGCTGG
GTAAATCATG ACACCGGTAA AAAAACAGAT CCGAGAATGC AGTTTGTTGA GATTCGACAA
TTGCAGGACA TTTTAGAAGC TTTTGCTAAA AAGCTGATTG TTTTATTGAA TATTAAAGAT
CTTCATCCGG AGTTCATTCA TAAACTGAGT CATTTGTTTA ATGAAAACAA AGGAGATAAT
TCTGTGACTT TTGAAATCAT GGAATTAGAA AAAATAAAAA AACTGGTTGA GGTAGAGACT
CCAACTGATT TTGAAGATGC TGATGATGCG GTTTTTGATG ATGAAAATGA AGATGCCGCA
ATTGAGGATA CCAAAATACA AGAAGTAAAT GAGGTAGAAG AAATAAAAGT AGTTACCAAG
CTTACGATGC CAAGCAGAAG ATTGAAAGTA AGAATTTCCA CCGAGCTGCT GCAGGAATTG
GAAAAAATGC AGATAAATTT TAAGTTGAAC TAA
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| Protein sequence | MYLIFDTETT GLPKRWDAPI TDSDNWPRCI QIAWQLHDEM GQLIEHQDYL VKPEGFNIPY
DAERIHGIST ELAEADGITL AEVLEKFNIA LSKTKFIVGQ NLGFDVNIMG AEFHRMGVES
QMASMPVLDT CTEVTASLLQ LPGGRGGKFK LPTLTELHSY LFDQPFAEAH NATADVEATT
RCFLELVRRE VFTKEELDVP KEYFKEFQER NAEPFKLIGL KHINLKAASD KIREQLKALA
GEGQQTVVSE EDKADFKAAK FAHLHNHTQF SVLQSTIGIG NIVAATAKNG MPAVAMTDTG
NMMGAFHFVS AVMNHNKAAS GKNKALVEAG EEPTETEIKP IVGCEFNICE NHLDKSKKDN
GYQVVLLAKN KAGYHNLAKM ASIAYTEGFY YVPRIDKNIV EKYKGDIMVL SGNLYGEIPS
KILNIGENQA EEALIWWKEQ FGEDFYLEVM RHNQEDENRV NKTLIEFSQK HNVKLIATNN
TYYLNKEDAN AHDILLCVKD GEKQATPIGR GRGYRYGLPN QEYYFKSEAE MKKLFADLPE
AIINIQEVID KVEGYSLYRD VLLPKFEIPD EFMVPEDEED GGVRGENKYL RHLTMEGAKR
RYGEITESIQ ERLDFELMTI SNSGYPGYFL IVQDFIAEAR KMDVSVGPGR GSAAGSAVAY
CLGITNIDPI KYDLLFERFL NPDRVSMPDI DIDFDDEGRG RVMDYVINKY GQKQVAQIIT
YGKMATKSAI RDTARVLDLP LFEADRIAKL IPGMMPSKWN LARFISESEE EVKKALRSDE
FDNVKELIAI ANEDDLAGET IQQAKILEGS MRNTGIHACG VIITPSDITN YVPVTTAKDS
DLYVTQFDNS VAESAGLLKM DFLGLKTLTL IKDTVKLVKY RTGIDLDPDN FPIDDEETYA
LFQRGETVGI FQYESPGMQK YMKDLKPTVF GDLIAMNALY RPGPLEYIPS FVRRKNGDEE
IKYDLDACAE YLSETYGITV YQEQVMLLSQ SLAGFTKGEA DVLRKAMGKK QKDVLDKMKP
KFVEQAAQKG HDAKILEKIW KDWEAFASYA FNKSHSTCYA WIAYQTAYLK AHYPAEYMAA
VLSNNMNDIK QVSFFMEECK RMGLQVLGPD VNESYYKFTV NDDYAVRFGM GAIKGVGSGA
VETIVENRKD GRYKSIFDLA KRIDLRAANK KAIENLALAG GFDSFEGTTR AQYFHDDGDG
ITFYEKAMRY GSKFQENENS SQVSLFGEAS EVQIAEPVVP PCEDWSTMEK LAKEKEVVGI
YISGHPLDDF RFEMKYFCNA RLEALKSMNE YVGKNLNFAG IINNVQHRVA KNGKGWAAFN
LEGYDESYEF KIFGEEYLKF RHFLIQNNFA FLKILIKDGW VNHDTGKKTD PRMQFVEIRQ
LQDILEAFAK KLIVLLNIKD LHPEFIHKLS HLFNENKGDN SVTFEIMELE KIKKLVEVET
PTDFEDADDA VFDDENEDAA IEDTKIQEVN EVEEIKVVTK LTMPSRRLKV RISTELLQEL
EKMQINFKLN
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