Gene Fjoh_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1232 
Symbol 
ID5090032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1405312 
End bp1406085 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content33% 
IMG OID644740634 
Producthypothetical protein 
Protein accessionYP_001193583 
Protein GI146298992 
COG category[S] Function unknown 
COG ID[COG4760] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTTA ATTCAAAAAA TCCATTTTTA AGTAACAAGC GTTTTTCATC AAATGCTGTT 
TCGAGAGCTG AAGAAGTACA CGAAGCAAAG ATTATTGACT ACAATCAGGA AATGACCTTG
TCTGGTACAA TAAATAAAAC AGCTATTTTA TTTTTAATTT TATGCGGTTC TGCAATGGTA
ACATGGTGGA TGGCATTTAA CGGAATGAAT ATTATGATTC CTGCTATTGG AGGTGCAATT
GTTGGATTTG TTTTAGTACT TATTTCTGCA TTCAAACCAC ATTTATCACC ATACTTGGCT
CCTGGTTATG CCTTATTTGA AGGATTATTT ATTGGGGGAA TCTCAGCTAT TTTTGAAGCT
ATGTACCCTG GAATTGTAAT TAATGCAGTA GGCGCAACTT TGGTTACTTT CTTGGTATGT
CTGGGATTAT ATAAATTTAG AATCGTAAAA GTTACAGAAC AATTCAAATC GGTTGTTATT
GCTGCTACAC TGGCAATCGC TACTTATTAT TTAATTTCAT GGATTGTTTC TATGTTTATA
AACTATCAGC CTGTTCATCA CGGAAATTCA ATGATGAGTA TTGGAATCAG CATTTTTGTA
ATCGTAATTG CTGCTTTGAA TTTATTCTTA GATTTTGATC AAATCGAAAA AGGAGTTGAA
CAAAGAATGC CAAAATTCAT GGAATGGTAC GGTGCAATGG GATTAATGGT AACATTAGTT
TGGCTGTATA TTGAATTTTT AAGATTACTA TCTAAATTTG CAAGCAGAGA TTAA
 
Protein sequence
MAFNSKNPFL SNKRFSSNAV SRAEEVHEAK IIDYNQEMTL SGTINKTAIL FLILCGSAMV 
TWWMAFNGMN IMIPAIGGAI VGFVLVLISA FKPHLSPYLA PGYALFEGLF IGGISAIFEA
MYPGIVINAV GATLVTFLVC LGLYKFRIVK VTEQFKSVVI AATLAIATYY LISWIVSMFI
NYQPVHHGNS MMSIGISIFV IVIAALNLFL DFDQIEKGVE QRMPKFMEWY GAMGLMVTLV
WLYIEFLRLL SKFASRD