Gene Fjoh_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1198 
Symbol 
ID5089743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1362047 
End bp1363246 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content34% 
IMG OID644740600 
Producthypothetical protein 
Protein accessionYP_001193549 
Protein GI146298958 
COG category[S] Function unknown 
COG ID[COG2311] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAATT CTTATCATCC TGTCGAGCAG AGTAAAAGAA CTGTAATTGT CGACATCCTT 
CGAGGCTGGG CTATACTGGG CGTAGCCATT GGCAATTATT TAGATTTTTT ATACATCGGT
ATAGAAAAAG ATATTAAGTA CGATACTTTT TCGGAAGTAC TTCAAACTAT TAACCGCTAT
TTTTTTGCGG CAAAATCCTG GACATTACTG ACTCTTTTAT TTGGCTACGG ATTTGCGATT
TTAATTAATA ATGTCGCTTC CAAAGGAAAA AATCCCGTTG CATTTTTTAC CTGGCGAATG
GCTTTACTAT TTATTTTAGC CTTTATTAAT TCTTCTTTCT GGTTAGGTGA CATCTTAAAA
GATTATGCCT TTCTAGGACT TGTATTATTG CTTTTTTACA GATGTTCTGC CAAAACTTTA
GCCGTTATTT CTACTGTGAT TGTACTTACA GTTCCTTTCT TAATGGCTTA TATAAACGGA
TTGAAAATAG AACATACTGC AATTTCTTCA AATCCTGAAT ACTTAAAACT ATATCATTCT
GGAAACTGGA TTGATTTTTT CAGATTTAAT CTGCTGGCTT CATTGTATGA GCAGATTATC
GTTCCGGGCT ATGCGATTAC GGCTCATTAT GTAATGCTGG GATGTATGCT TTTTGGTTTT
ATGCTGCAAA AACTAAACTT TTTCAACCGC TTAATAGAAT TGAAAAAACT GCTGCAATAT
GTTTGTATCA TTAGTTTTCT GTGTGCTGTT GTTATTGGAA TAGGATTTAA TATTGCTATA
ATCTACAAAG CAGGATTTTT AAAATTTTTC CATCCGCTTT ACTGGCTGGT TTTAAGCACG
ATGATTTTTA TATCAACAGG AATCTGCCTC TTATATATTA ATGGAAAATT AAAAACGATT
TTTAGTTATT TTAGTGCAGG CGGAAAAATG ACGCTGACCA ATTATATAAG TCAAAATATA
TTGGCTGCCT TGATTTTCTC AGGAATTGGT TTGGGTATTG CTGATACAAT GCCGTATTGG
TTTTACTTTT CGGTGGCGGT TTTTATTTTT GTTGTCCAGT TATTTATCAG CAAATGGTGG
CTTTCAAAAT ACAACTACGG CCCAATTGAA TGGTTATGGA GATCTGCCAG TTACAGAGAA
TGGTTTCCTC TAAGAAAAAT ACAGCCGGAG GTTACTCCTG CTGATATAAA AACAATATAA
 
Protein sequence
MTNSYHPVEQ SKRTVIVDIL RGWAILGVAI GNYLDFLYIG IEKDIKYDTF SEVLQTINRY 
FFAAKSWTLL TLLFGYGFAI LINNVASKGK NPVAFFTWRM ALLFILAFIN SSFWLGDILK
DYAFLGLVLL LFYRCSAKTL AVISTVIVLT VPFLMAYING LKIEHTAISS NPEYLKLYHS
GNWIDFFRFN LLASLYEQII VPGYAITAHY VMLGCMLFGF MLQKLNFFNR LIELKKLLQY
VCIISFLCAV VIGIGFNIAI IYKAGFLKFF HPLYWLVLST MIFISTGICL LYINGKLKTI
FSYFSAGGKM TLTNYISQNI LAALIFSGIG LGIADTMPYW FYFSVAVFIF VVQLFISKWW
LSKYNYGPIE WLWRSASYRE WFPLRKIQPE VTPADIKTI