Gene Fjoh_1104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1104 
Symbol 
ID5090182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1245934 
End bp1246812 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content33% 
IMG OID644740504 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_001193456 
Protein GI146298865 
COG category[R] General function prediction only 
COG ID[COG4261] Predicted acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTCAAT GGGATGGTAA ATCAAAAGGA ACTGTTTTAG GTTATAGAAT ATTCGTTTTT 
TTGATAAAGA AAGCGGGTGT TAAGTCTGCT TATGGTTTAC TTTACTTTGT TGCTTCTTAT
TATTTCCTGT TTCTAAAAAA AAGCAACCGC GCGATTTTTT ATTACTTTAA AGAAAGGCTT
CAATATTCCA CTTTTAAATC TAAAAAAATG GTTTTCAAAA GTTACTATAC TTTTGGGCAG
ACCATTATTG ATAAAATTTC CATTTCGGCC GGAATGCGAA ATAAATTCAC CTATGAATTT
GACGGAATCG AAATTCTAAA AAATCTTTTA GCCGAAAAAA AAGGCGGCGT TTTAATAAGC
GCGCATGTTG GGAATTTTGA AATCGCCGAA CACTTTTTAG GCGATATCGA TCTTGATTTT
CAAATCAATC TTGTTACTAC AGATTTAGAG CATTCCGCAA TCAAAAATTA TTTAGAAAGC
GTTACCCAAA AACCAACCGT AAAATTTATT ATTATTAAAG AAGACTTGTC TCATATTTTT
GAGATCAATG CAGCTTTGGC TAATAATGAA CTGGTTTGTT TTACCGGCGA TCGTTATTTT
GAAGGTACAA AATCTCTTTC TGAAAATATT CTCGGCAAAG AAGCCAATTT CCCGGCAGGG
CCATTTTTAA TCGCATCAAG ATTAAAAGTT CCGGTTGTGT TTGTGTATGT AATGAAAGAA
CCAAATCTGC ATTATCATCT TTATGCAAGA GAAGCTACAG TAAAACACCG CGACGAAAAA
GCACTTTTAA AAGAATACGT AACAAGCGTA GAAAGCATTG TAAAAAAATA TCCGCTGCAA
TGGTTTAATT ATTTCGACTT TTGGAATGAT TTAAATTAA
 
Protein sequence
MSQWDGKSKG TVLGYRIFVF LIKKAGVKSA YGLLYFVASY YFLFLKKSNR AIFYYFKERL 
QYSTFKSKKM VFKSYYTFGQ TIIDKISISA GMRNKFTYEF DGIEILKNLL AEKKGGVLIS
AHVGNFEIAE HFLGDIDLDF QINLVTTDLE HSAIKNYLES VTQKPTVKFI IIKEDLSHIF
EINAALANNE LVCFTGDRYF EGTKSLSENI LGKEANFPAG PFLIASRLKV PVVFVYVMKE
PNLHYHLYAR EATVKHRDEK ALLKEYVTSV ESIVKKYPLQ WFNYFDFWND LN