Gene Fjoh_1095 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1095 
Symbol 
ID5090173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1238931 
End bp1240214 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content35% 
IMG OID644740495 
ProductABC-2 type transporter 
Protein accessionYP_001193447 
Protein GI146298856 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATATA AAATTTGGAT GTCGATCGTA AAAGAATTTT TACTGCTTAA ACGTGATTTA 
GGCGGATTGA TTATTTTGTT TATAATGCCG TTGGTTTTGG TTATTACCGT TACGTTAATT
CAGGACAGCA CTTTTAAAAC CGTAAGCGAT TCTAAAATTC CAATTTTATT GGTGGATAAC
GACAAAGGTT CGGTTTCGAA AACTGTTTTT GAAAATTTAG AAAAAAGCAA TCTGTTTAGT
GTTGTAACAC GAATCGATAA TAAAACAATT AGTGAAGATG TTGCCAGAGA AAATGTTTTC
AAAGGAAAAT TTCAATTGGC AATTATAATT CCAGAAAAAT TAAGCTCTGA TTTACAAGCC
AAAGTAGATC AAAATGTCGA AAAAATTGTC AGCAATTTAG GTTTTGCAGA TAGTACAGCG
GCCAGCGAAC CTCAGCGCAT TATCAAAGAA AAAGAGGTAA AACTATATTT TGATCCGGCA
GTGCAGATGA GTTTCAAAAA TGCGGTCATG AGTTCGATTG ACAAAATGAT TTCGCAGATC
GAAACCAAAT CAATTTACAC CACTTTCGAA AAACAATTAG GAGAAGGAAG CACCAATTTT
GAGCAGAAAA GTTTCATTTC TTTTAAAGAG ATAATTCCAA AGATAAACAA CAAAGAAATT
CGTCCAAATT CGGTGCAGCA TAACGTTCCG GCGTGGACAC TCTTTGCGAT ATTTTTCATT
GTAATTCCGT TATCGATTAA TATTGTAAAA GAAAAATCAC AAGGAACTTT CGTTCGATTA
AGAACCAATC CAGTTTCTAA TTTAGTGGTG ATTATTGGTA AAACTATCAC GTATTCTGTA
ATCTGTATGA TTCAGTTTTA TATGATGGTT GCCGTTGCAG TTTTTCTATT TCCATCCATC
GGACTGCCGT CTTTAAATAT TGAAGGCCAT TTAGCATTAA TGAGCGTTGT AGCCTTGTTT
TCAGGTTTCG CCGCCATTGG ATTCGGAATT TTATTAGGAA CAATTGCAAG CACACAAGAG
CAATCGGCTC CGTTTGGTGC AACAAGTGTG ATCATTCTAG CTGCAATTGG CGGTATCTGG
GTTCCGGTTT TTGCCATGCC AAAGATTATG CAGATTATTG CCAAATCGTC TCCAATGAAC
TGGGGATTAG ATGCTTTTTA CGACGTTCTT TTACGCAACG TTTCTTTCCT TGAAATTATT
CCAAAAATAA GTTTGTTATT TTTGTTTTTC ATTCTCACAA CAGCCATCGC ATTATTTTAT
GATAAAAAGA AAAGAGCAGT TTAA
 
Protein sequence
MLYKIWMSIV KEFLLLKRDL GGLIILFIMP LVLVITVTLI QDSTFKTVSD SKIPILLVDN 
DKGSVSKTVF ENLEKSNLFS VVTRIDNKTI SEDVARENVF KGKFQLAIII PEKLSSDLQA
KVDQNVEKIV SNLGFADSTA ASEPQRIIKE KEVKLYFDPA VQMSFKNAVM SSIDKMISQI
ETKSIYTTFE KQLGEGSTNF EQKSFISFKE IIPKINNKEI RPNSVQHNVP AWTLFAIFFI
VIPLSINIVK EKSQGTFVRL RTNPVSNLVV IIGKTITYSV ICMIQFYMMV AVAVFLFPSI
GLPSLNIEGH LALMSVVALF SGFAAIGFGI LLGTIASTQE QSAPFGATSV IILAAIGGIW
VPVFAMPKIM QIIAKSSPMN WGLDAFYDVL LRNVSFLEII PKISLLFLFF ILTTAIALFY
DKKKRAV