Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_1088 |
Symbol | |
ID | 5091818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 1233144 |
End bp | 1234343 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644740488 |
Product | beta-ketoacyl synthase |
Protein accession | YP_001193440 |
Protein GI | 146298849 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAAAG GTGTTGCAAT AACGGGAATG GGAATTATCT CCGCAATCGG GAATTCGGTT GAGGAAAACT ACCATTCATT AATCGAAAAT AAAATCGGGA TTTCCCGTAT CTCCAATATT TCTACAGTTC ATGCAGATGT TATTAAAGTG GGGGAAATTA AAAAAACCAA CGATGAACTG ATCAGCGAAC TGGAATTAAA CAGCGATAAT AATTTTTCGA GAACCGCTAT GATTGGTACT TTGGCAGCAA AACAAGCTGT TGAAAATGCC GGCATAACCT CTATCAACGA ATTTAGAACC GGACTTATTT CGGCTACTAG TGTAGGCGGA ATGGACATGA CAGAGAAACA TTATTACGAT TATTTCGAAA AACCGGAATT GGTTAAATAT ATTACCTGTC ACGACGGCGG CGATGTTGCT GAAAAGATTG CCGAAGAACT GGGTTTAAAA GGAATGGTGT CGACAATAAG TACCGCTTGT TCGTCTGCAG CCAATTCAAT TATGCTGGGC GCGAGATTAA TCAAAACCGG AAAACTGGAC CGCGTAATTG TAGGCGGAGC CGATGCTTTG TCAAAATTTA CCATAAACGG ATTTAAGACT TTGATGATTT TATCTGACGA TTACAACAAA CCTTTTGACA ATAACAGAAA AGGGTTAAAT CTTGGAGAAG CTGCTGCTTT TTTGGTTTTA GAATCGGATG AAATTGTCGA GAAACAAAAT AAAAAAGTAT TGGCAAGAGT TTCAGGTTAT GGAAATGCCA ATGATGCTTT TCACCAAACG GCTTCTTCTG AAAACGGAGA CGGTGCTTTT CTGGCTATGA AAAAAGCTTT TGAAGTTTCG GGTTTAAAAC CTTCTGAAAT TGACTACATC AACGTTCACG GGACTGCAAC GCCAAATAAC GATTTATCCG AAGGAAGAGC TTTACGCCGC ATTTACGAAG AAGAAAAAGT TCCGGATTTT AGTTCTACCA AACCGTTTAC TGGTCATACT TTAGCAGCTG CAGCGGCAAT TGAAGCGGTT TACAGCGTTT TGGCAATTCA GAATAATGTT GTTTATCCGA ATTTGAATTT CGAAACGCAG ATGGAAGAAT TTGACTTAAC ACCACAGACT TCTTTAATAA ATAAAAATAT CGAACACGTT TTATCTAATT CTTTCGGATT TGGAGGAAAC TGTTCAACAC TTATATTTTC AAAAAGCTAA
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Protein sequence | MSKGVAITGM GIISAIGNSV EENYHSLIEN KIGISRISNI STVHADVIKV GEIKKTNDEL ISELELNSDN NFSRTAMIGT LAAKQAVENA GITSINEFRT GLISATSVGG MDMTEKHYYD YFEKPELVKY ITCHDGGDVA EKIAEELGLK GMVSTISTAC SSAANSIMLG ARLIKTGKLD RVIVGGADAL SKFTINGFKT LMILSDDYNK PFDNNRKGLN LGEAAAFLVL ESDEIVEKQN KKVLARVSGY GNANDAFHQT ASSENGDGAF LAMKKAFEVS GLKPSEIDYI NVHGTATPNN DLSEGRALRR IYEEEKVPDF SSTKPFTGHT LAAAAAIEAV YSVLAIQNNV VYPNLNFETQ MEEFDLTPQT SLINKNIEHV LSNSFGFGGN CSTLIFSKS
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