Gene Fjoh_1070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1070 
Symbol 
ID5091800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1212863 
End bp1213975 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content34% 
IMG OID644740470 
Producthypothetical protein 
Protein accessionYP_001193422 
Protein GI146298831 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGAATCA TTGTTGGGAC AATGGCTTTG TTTGTGGTTT TATCTGTTTT TAGCGGATTA 
AAAGTTTTTA GTCTTTCGTT CACAAACGAG ATCGATCCAG ATTTAAAAAT GACCAGTACG
TTAGGAAAAT CATTTTTTAT TTCGGCTCAG CAGGAACAAG ACCTAAAAAA AATAAATGGT
GTAGCCTCTT ATACTAAAAT TATTGAAGAA CGTGTTTTGT TTATATTCAA GGATAAACAG
CACGTTACCT ATTTAAAAGG TGTTGACAGC CTTTATCCTG TTGTAAACGA TATTAAAAGA
AAACTCTTTA ATGGGCAGTG GCTAAAACCA GATTCCTATC AGGTAGTTAT TGGCTACGGA
ATTGCACAGG ATTTTTCGAT GGGAATTCTC GATTTTGAAA ACCCGCTGCA AATCTTCGCT
CCAAAACCGG GAAAAGGTGC AATCGAAAAT CCCGAAGAAG CTTTTAATAA AACAGATGTT
CTGCCAGTTG GAATTTACTC AATAAGCGAA GATTTAGATT CTAAATATGT TTTTGCAGAT
TTAGGTTTAA CACAGGAATT ATTGATGTAT AAACCCAATC AGATTTCAGG AATCGAATTT
CATCTCAAAG AAAATGCAGA TGAAAATGCT GTAAAAGCAC AGCTTGAAAA GATTTTCAAT
AATAAAATTA CTTTAAAAAA CAGGGCACAG TTAAATGAGT CTTTGTACAA AATGCTCAAT
ACCGAAAATA TTGCCGTTTA TTTAATTTTT ACTCTTGTAA TTATTGTGGC ACTTTTTAAC
CTGATTGGAG CTTTGATTAT GATGATTTTA GATAAAAAAG GAAATCTTAA AACCCTTTTT
AATCTTGGAA CAGAAATCAA CAATCTGCGA AAAATATTCC TGCTTCAGGG AACGCTTCTG
AGCATTTTTG GAGGTATTAT CGGGTTGGCT TTAGGAATTA TTCTAGTGAT TCTGCAGCAG
CAATATGAGT TAATTATGAT CACGCCGACT TTAGCTTATC CTGTAGTTTT TACACTGGAA
AATGTTTTGA TCGTAATGGC AACCATTGTT TCTCTTGGAT TTATTGCTTC GTTAATTGCA
AGCAGCCGTG TAAGTAAAAA ATTACTGGAT TAA
 
Protein sequence
MGIIVGTMAL FVVLSVFSGL KVFSLSFTNE IDPDLKMTST LGKSFFISAQ QEQDLKKING 
VASYTKIIEE RVLFIFKDKQ HVTYLKGVDS LYPVVNDIKR KLFNGQWLKP DSYQVVIGYG
IAQDFSMGIL DFENPLQIFA PKPGKGAIEN PEEAFNKTDV LPVGIYSISE DLDSKYVFAD
LGLTQELLMY KPNQISGIEF HLKENADENA VKAQLEKIFN NKITLKNRAQ LNESLYKMLN
TENIAVYLIF TLVIIVALFN LIGALIMMIL DKKGNLKTLF NLGTEINNLR KIFLLQGTLL
SIFGGIIGLA LGIILVILQQ QYELIMITPT LAYPVVFTLE NVLIVMATIV SLGFIASLIA
SSRVSKKLLD