Gene Fjoh_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_1050 
Symbol 
ID5091780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp1194439 
End bp1195134 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content33% 
IMG OID644740450 
ProductABC transporter related 
Protein accessionYP_001193402 
Protein GI146298811 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATACAAG TAAATCAACT ATCAAAAAAA TATAACGGAA CTACAGTTTT GAATATTAAC 
AATCTTGAAA TCCCAAAAGG ACAAAGTTTT GGATTAGTGG GAAATAACGG AGCAGGAAAA
ACCACTTTTT TTAGTCTGCT GTTAGACCTT ATTCAACCAA CTACAGGATA CGTAAAAAGC
AATGATATTC AGGTAAATAC AAGTGAAAAC TGGAAATCTT TTACAGGTTC ATTTTTAGAT
GAAAGTTTCT TGATAGGATA CTTAACACCA GAGGAATATT TTTATTTTAT TGGAGATCTT
CGCCATCAAA ACAAAGCCGA TATTGATGCA TTACTGGCTA AGCACGAAGA ATTTTTTAAC
GGAGAAATTT TAAACAACAA AAAATACCTT CGCGATTTAT CTAAAGGAAA TCAGAAAAAA
GTGGGCATAA TTGCGACCTT AATTGGTAAC CCTGAAGTTG TAATTTTAGA CGAACCTTTT
GCCAATTTAG ACCCAACAAC AGTAAGCCGT TTAAAGAAAA TTATTAATGA ATTAGCTGAT
GATCCAAATG TTACTGTTTT GGTTTCAAGC CACGATTTAC AACACACGGT CGAAGTTTGT
GATCGAATTG TTGCACTCAA CAAAGGCGAA ATTGTAAAGG ATATTCAAAC ATCAAAAGAA
ACCTTACAAG AACTCGAATC GTTTTTTGCG GTTTAA
 
Protein sequence
MIQVNQLSKK YNGTTVLNIN NLEIPKGQSF GLVGNNGAGK TTFFSLLLDL IQPTTGYVKS 
NDIQVNTSEN WKSFTGSFLD ESFLIGYLTP EEYFYFIGDL RHQNKADIDA LLAKHEEFFN
GEILNNKKYL RDLSKGNQKK VGIIATLIGN PEVVILDEPF ANLDPTTVSR LKKIINELAD
DPNVTVLVSS HDLQHTVEVC DRIVALNKGE IVKDIQTSKE TLQELESFFA V