| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0944 |
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| Symbol | |
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| ID | 5091358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 1056762 |
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| End bp | 1057685 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 644740344 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001193297 |
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| Protein GI | 146298706 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.700736 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGAAA AAACAATCAG AATTGGAACG CGTGACAGCG AATTAGCACT TTGGCAGGCA
CATAATGTCG AGAAAAAACT AAACGATTTA GGTTATAAAA CCTCAATTGT TGCGGTTAAA
TCTCAGGGCG ATATTATTCT GGATAAACCT CTTTACGAAT TAGGGATTAC CGGAATTTTT
ACCAAAACGC TTGACATTGC TATGATCAAT GGCGATATTG ATATTGCGGT GCATTCTATG
AAAGATGTTC CAACGGCTTT ACCAAAAGGT ATCGTTCAGG GTGCTGTTTT ACCACGAGCC
AATGTTCTGG ATATTTTAGT TCATAAAGGA AATCCTGATT TTACAAATCC AAGTACCATC
GCAACAGGAA GTTTGCGTCG TCAGGCACAA TGGTTTAATA AATACCCAAA TCATACGGTT
GTTGATTTAC GCGGAAACGT GAATACACGC ATGCAAAAAT TACAAGACAA TAATTGGGAC
GGAGCTGTTT TTGCTGCTGC AGGTTTGGAG CGCATCAACT TAAAACCAGA AAATTATATC
AATTTAGATT GGATGATTCC GGCACCGGCA CAAGGAGCAA TGCTTGTGGT GGGAATGGAA
AATGACAATT ATACATTGGA TGCTCTTTCT CAGCTAAATG ATATTGAAAC AGAAATCTGT
ACACATATCG AACGTCAGTT TTTAAGAACA CTTGAAGGCG GATGTACAGC CCCAATTGGA
GCTTTAGTAA CGTATAACGA GGACGAAGAT ACTTTGCATT TTCAAGGTGT TTTACTTTCT
ATTGACGGAA AACAAAAACT GGAAATCAAC AAAACCGTTG ATATTTCGGA GTGGAAAAAA
CTAGGTTTCA ACTCAGCTCA GGAAATCTTG AACAATGGCG GAACGGAATT AATGCAAAAG
ATTAAAGAAT CCCTGAAAAA ATAA
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| Protein sequence | MAEKTIRIGT RDSELALWQA HNVEKKLNDL GYKTSIVAVK SQGDIILDKP LYELGITGIF
TKTLDIAMIN GDIDIAVHSM KDVPTALPKG IVQGAVLPRA NVLDILVHKG NPDFTNPSTI
ATGSLRRQAQ WFNKYPNHTV VDLRGNVNTR MQKLQDNNWD GAVFAAAGLE RINLKPENYI
NLDWMIPAPA QGAMLVVGME NDNYTLDALS QLNDIETEIC THIERQFLRT LEGGCTAPIG
ALVTYNEDED TLHFQGVLLS IDGKQKLEIN KTVDISEWKK LGFNSAQEIL NNGGTELMQK
IKESLKK
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