Gene Fjoh_0886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0886 
Symbol 
ID5091742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp999032 
End bp1001806 
Gene Length2775 bp 
Protein Length924 aa 
Translation table11 
GC content38% 
IMG OID644740286 
Productpeptidase M4, thermolysin 
Protein accessionYP_001193239 
Protein GI146298648 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3227] Zinc metalloprotease (elastase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAA AATTACCAAG AATTATTACA GCAGCTTTAC TAATTTTATC ACTTTCTGCA 
GCTGCGCAGG TTACTGACAA AAGGATAAGC CAAAAAAATG TATCCGAAAA CGGACAGCCT
AGTTTAATTA CCTTTAGCGA TGTATCGACG TATAAAGGAA CAGATTCTCA AAAAGTTTTT
AAAGAGCAGC TTGGGCTAAA AGACAATCAG ACTTTTAGAA AAGTAAAAAC AGAAACTGAT
AAACAAGGTT ACACGCATGA AAAATTTCAG TTGTATGAAC AGGGAATTAA AGTAGAATTT
GCCAATTATA CATTACATTC TGAAAACGGA AGATTAGTTT CGATGAATGG AGAGTATTAC
AACATCGAAA ATGTAAAACT TACTCCGGCT CTTTCTCCCC AGGAAGCTTT TAACAGAGCA
GTTAGTCATA CACACGCGTC TGAATATCTT TGGGATAAAC CACAAGATGC GAAAGAAATT
GGATATGAAA AACCTGTTGG TGAACTGGTT CTTCTGCCAG ATATGGAACA ACAGGGAGAA
AAAAGAACGA CAGACAATGT TCGTCTTGCT TACAAATTTG ATATCTATGC AACAAAACCT
TTAAGCAGAG GCGATTTGTA TATAGATGCT CAAACAGGAA AAGCATTGTT TTACAATGCT
GCAATTAAGC ACTTAAACGA TAATGTTCAT GCAAGAAAAG TTTCATCTTC AAAAAGTGCT
GATAAAGAAA CGGCTTCTTC TTCTAAAAAA ACAATTGTTG CCGCAAATGC AGAGACACGT
TACAGTGGAA CGCAGACTAT TCAAACAACT TTAAGCGGCT CATCTTATAT TTTATTAGAT
GGAACGCGCG GCAGTGGAAT TCAAACCTAT AATTCTGCAA GAACAGCAAC TTATCCAACA
ACAAACTTTA CCGATGCTGA TAATAACTGG ACAGCAGCAG AATATAATAA TACCAATAAA
GACAATGGAG CGCTCGACGC ACATTGGGGT GCAGAAATGA CCTATGATTA TTGGTCTGCA
GTACACGGCA GAAATAGTTA TGACGATGCC GGAGCAAAAA TTAAAAGTTA TGTGCATTAT
AATTTAATTG CCGCAGGATA TTCAAGTAAT AACAATGCCT TCTGGAACGG AAGTGTTATG
ACATACGGCG ACGGAAGCGG TACAGGCGGA TTTGATATCT TGACTTCATT AGATGTTGCC
GGACATGAAA TTGGCCACGC AGTTTGTACG TATACAGCAA ACTTGGCATA TCAAAAAGAA
TCTGGAGCAA TGAACGAAGC TTTCTCTGAT ATTTGGGCAG CTTGTATTGA ATATCGCGCC
GCGCCGACAA AGTCGACTTG GTTAGTAGGT GAAGATATTG AAAGAAGAAG CGGACACGTA
GCTCTTCGTT CAATGAGTAA CCCAAAATCA GAAGGTCAGC CGGATACTTA TGGAGGAACA
AATTGGATTA GTGTAAGCTG TACGCCGACA AGCAGCAATG ATTATTGCGG TGTGCATACC
AACTCTGGAG TTTTTAATCA CTGGTTTTAT ATTTTATCTG TTGGAAAAAC AGGAACTAAT
GATATTGGAA GTTCATACAA CGTAACAGGT ATTGGAATTG ATAAAGCAGC TAAAATTGCA
TTTCGTTTAG AAGATGTTTA TTTAACTTCA AACTCAACTT TTGCAAATGC AAGAACATCA
GGAATTCAAT CAGCTATTGA TTTGTATGGA GCAGGTTCTG CAGAAGTTAT CGCAACTACA
AATGCATTTT ATGCGATAGG AGTAGGTGCA GCATATTCTG GAACTACAGA TACAGTAGCC
CCATCGGCGC CAACAGGTTT GGCAGCTTCT GGAACAACCG GAACAACAAC AAATTTGACA
TGGACAGCTT CAACAGATAA TGTTGCCGTT ACAGGATACG ATATTTATCA GGGAACAACT
TTAAAAGGTT CATCTACTAC AACTTCATTC AATGTTACGG GATTAACAGC ACTAACAACT
TACAGCTTTA CTGTAAAAGC TAAAGACGCT GCTGGAAATG TTTCTGCAGC AAGTAATGCG
GTTAGCGTAA CTACAACAGC AGCGACAGTA TCATATTGTG CTTCTCAGGG AAACAGCACA
GCTGATGAAA GAATAAGCAA AGTTGTTTTT GGAACAATCA ATAATACGTC AACTGGAACA
GCAGGATATG AAAATTATAC TGCTATTTCT ACAAATGCAG CAAGAGGAAG TGCTTATACA
ATCACTATAA CTCCGGTTTG GACATCTACA ACTTACAATG AAGGTTATGC AGTATTTATC
GATTATAACC AAGATGGAGA TTTTGCAGAT TCTGGGGAAA CAGTTTGGAC AAAAGCAGCA
TCAAAAACTA CTCCGGTAAC AGGAACGATT ACAATTCCGG CAACTGCAGT TTTAGGCGCA
ACAAGAATGA GAGTTTCTAT GAAATATAAT GCTGTTCCAA CATCATGCGA AGGATTCTCT
TATGGACAAG TTGAAGATTA TACCATAAAC ATAACAGCTT CTGGAACGAT CGAAGCAGAA
CCAATTGCTG CGGGAATTGT TGAAACTGAA ACAAAAGGAT TTGCATTGTA TCCAAACCCT
GTTGAAAGTG AGCTAAATGT TACTGTTTCA GAAGAAAATG CATATTCGTA TAAAATTATT
AATGCTCTTG GGCAGCAGCT TGGTTCTGGA CAAGTTTCAG GCGCAATTGA TGTAAGCAGA
TTAAGCACAG GGATTTATCT TATCGAATTG AATAATGGCA AAGAAAAAAT AGTTAAGAAA
TTTGCTAAAA AATAA
 
Protein sequence
MEKKLPRIIT AALLILSLSA AAQVTDKRIS QKNVSENGQP SLITFSDVST YKGTDSQKVF 
KEQLGLKDNQ TFRKVKTETD KQGYTHEKFQ LYEQGIKVEF ANYTLHSENG RLVSMNGEYY
NIENVKLTPA LSPQEAFNRA VSHTHASEYL WDKPQDAKEI GYEKPVGELV LLPDMEQQGE
KRTTDNVRLA YKFDIYATKP LSRGDLYIDA QTGKALFYNA AIKHLNDNVH ARKVSSSKSA
DKETASSSKK TIVAANAETR YSGTQTIQTT LSGSSYILLD GTRGSGIQTY NSARTATYPT
TNFTDADNNW TAAEYNNTNK DNGALDAHWG AEMTYDYWSA VHGRNSYDDA GAKIKSYVHY
NLIAAGYSSN NNAFWNGSVM TYGDGSGTGG FDILTSLDVA GHEIGHAVCT YTANLAYQKE
SGAMNEAFSD IWAACIEYRA APTKSTWLVG EDIERRSGHV ALRSMSNPKS EGQPDTYGGT
NWISVSCTPT SSNDYCGVHT NSGVFNHWFY ILSVGKTGTN DIGSSYNVTG IGIDKAAKIA
FRLEDVYLTS NSTFANARTS GIQSAIDLYG AGSAEVIATT NAFYAIGVGA AYSGTTDTVA
PSAPTGLAAS GTTGTTTNLT WTASTDNVAV TGYDIYQGTT LKGSSTTTSF NVTGLTALTT
YSFTVKAKDA AGNVSAASNA VSVTTTAATV SYCASQGNST ADERISKVVF GTINNTSTGT
AGYENYTAIS TNAARGSAYT ITITPVWTST TYNEGYAVFI DYNQDGDFAD SGETVWTKAA
SKTTPVTGTI TIPATAVLGA TRMRVSMKYN AVPTSCEGFS YGQVEDYTIN ITASGTIEAE
PIAAGIVETE TKGFALYPNP VESELNVTVS EENAYSYKII NALGQQLGSG QVSGAIDVSR
LSTGIYLIEL NNGKEKIVKK FAKK