Gene Fjoh_0882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0882 
Symbol 
ID5091738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp995743 
End bp996243 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content32% 
IMG OID644740282 
Productputative PAS/PAC sensor protein 
Protein accessionYP_001193235 
Protein GI146298644 
COG category 
COG ID 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGA ATAGCTCTGA AGATATAACA AACCGCACTT TGGTGCCAAT CTTGGCCTTA 
GATCTTCATT ATGAGTATTT AAATGAATTA AAAGCTGTTT TTGCCGATTT GAAAAAGGTT
AATAAAATTG CTTCCCAATT TACCTGGAAC GAAAAAGATC TCAAAATAGA AGAAAGAATC
AAAGAAGAAG TAGTGCTTAT TACTGATTTA GATTTGAAAA TTGTCTTTGC ATCAAACCGA
ATTAAAAGAA TGACGGGATA TCAGGAAGAA GAAGTTCTAG GAAAAACGCC TAAAATGTTT
CAGGGGCCTG CAACTTCTAA ATCTGTTTTA AAAGAAATTA AAGAAGCCAT CCGGCTAAAA
GTTCCGTTTA AAAAAACAAT AGAAAACTAT AAAAAAGACG GCAGGACTTA TAAATGCAGT
GTCGATGCCG CGCCGATTTA TAATTTAAAA GGCAAAATTT CACATTTCAT AGCATTTGAA
AAAGAAGATA AAAGTGCTTA A
 
Protein sequence
MKKNSSEDIT NRTLVPILAL DLHYEYLNEL KAVFADLKKV NKIASQFTWN EKDLKIEERI 
KEEVVLITDL DLKIVFASNR IKRMTGYQEE EVLGKTPKMF QGPATSKSVL KEIKEAIRLK
VPFKKTIENY KKDGRTYKCS VDAAPIYNLK GKISHFIAFE KEDKSA