Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0882 |
Symbol | |
ID | 5091738 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 995743 |
End bp | 996243 |
Gene Length | 501 bp |
Protein Length | 166 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 644740282 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_001193235 |
Protein GI | 146298644 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAGA ATAGCTCTGA AGATATAACA AACCGCACTT TGGTGCCAAT CTTGGCCTTA GATCTTCATT ATGAGTATTT AAATGAATTA AAAGCTGTTT TTGCCGATTT GAAAAAGGTT AATAAAATTG CTTCCCAATT TACCTGGAAC GAAAAAGATC TCAAAATAGA AGAAAGAATC AAAGAAGAAG TAGTGCTTAT TACTGATTTA GATTTGAAAA TTGTCTTTGC ATCAAACCGA ATTAAAAGAA TGACGGGATA TCAGGAAGAA GAAGTTCTAG GAAAAACGCC TAAAATGTTT CAGGGGCCTG CAACTTCTAA ATCTGTTTTA AAAGAAATTA AAGAAGCCAT CCGGCTAAAA GTTCCGTTTA AAAAAACAAT AGAAAACTAT AAAAAAGACG GCAGGACTTA TAAATGCAGT GTCGATGCCG CGCCGATTTA TAATTTAAAA GGCAAAATTT CACATTTCAT AGCATTTGAA AAAGAAGATA AAAGTGCTTA A
|
Protein sequence | MKKNSSEDIT NRTLVPILAL DLHYEYLNEL KAVFADLKKV NKIASQFTWN EKDLKIEERI KEEVVLITDL DLKIVFASNR IKRMTGYQEE EVLGKTPKMF QGPATSKSVL KEIKEAIRLK VPFKKTIENY KKDGRTYKCS VDAAPIYNLK GKISHFIAFE KEDKSA
|
| |