Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0847 |
Symbol | |
ID | 5092036 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 958542 |
End bp | 959813 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644740247 |
Product | seryl-tRNA synthetase |
Protein accession | YP_001193200 |
Protein GI | 146298609 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0172] Seryl-tRNA synthetase |
TIGRFAM ID | [TIGR00414] seryl-tRNA synthetase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTACAAA TCGCATTTAT TAGAGAAAAT CAGGAGAAAG TAATCAAGGC TTTAGCAAAA CGTAATATCG ATGCTAAAAG CGTTGTTGAA GAGGTGGTGC AATTAGACGA GAATCGTCGT GCAGCTCAAG TGGAATTAGA TAATACTTTA GCTGAATCTA ATAAATTGTC CAAAGATATA GGCGAATTAA TGAAAGCAGG AGAGAAAGTT AAAGCAGCGA TCTTAAAAGA AAAAACGGTT TCATTAAAAG AAAAAAGCAA AGAACTTGGC GAAAAAGCAG AAGCTTTAGC AGTTGAGTTA ACAAATAAAT TATACACACT TCCAAATCTT CCGGCTGATA TTGTTCCTGA AGGAAAAACT CCAGATGACA ATTTGAATGT TTTTGAAGAA GGTGAGATTC CGGTTTTACA CGAAGGCGCA CAGCCGCACT GGGAATTGGT AAAGAAATAC GATATCATCG ATTTTGAATT GGGTGTAAAA ATTACGGGTG CAGGTTTTCC TGTTTACAAA GGAAAAGGAG CTCGTTTACA GCGTGCTTTA ATCAACTATT TTTTAGATAA AAATACAGCT GCAGGATACA ACGAAGTTCA GGTGCCGCAT TTGGTAAACG AAGCTTCAGG TTACGGAACC GGACAATTGC CAGATAAAGA AGGGCAGATG TACCACGCCG GAGTTGATGA TTTATATTTA ATTCCAACGG CTGAGGTTCC GGTTACGAAC TTGTTCCGTG ATGTTATTTT AAACGAAAGC GAACTGCCAA TTTTACATAC GGCTTATACG CCATGTTTCC GTCGTGAAGC TGGTTCTTAT GGAGCACACG TTCGCGGATT AAACCGTTTA CACCAATTTG ACAAAGTAGA AATCGTACGT GTAGAGCATC CGGATAATTC ATACGCAGCG CTTGACGGAA TGGTGGAGCA TGTTAAAAAC ATTCTTCAGG AATTGAAATT GCCATACAGA ATTTTACGTC TTTGCGGAGG CGATATGGGT TTCACATCGG CATTGACGTA TGATTTCGAA GTATTTTCTA CAGCACAGGA CCGCTGGTTA GAAATTAGTT CTGTTTCTAA TTTCGAAACT TTTCAGGCAA ATCGTTTGAA ATTGCGTTTC AAAGATAAAG ATGGTAAAAA CCAATTAGCA CATACATTAA ACGGAAGTTC ATTAGCATTG CCAAGAGTTT TAGCCGGAAT TTTAGAAAAT TACCAAACAC CGGAAGGAAT TGTAATTCCA GAAGTTTTAC GTCCTTACTG CGGATTTGAT ATAATTGACT AA
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Protein sequence | MLQIAFIREN QEKVIKALAK RNIDAKSVVE EVVQLDENRR AAQVELDNTL AESNKLSKDI GELMKAGEKV KAAILKEKTV SLKEKSKELG EKAEALAVEL TNKLYTLPNL PADIVPEGKT PDDNLNVFEE GEIPVLHEGA QPHWELVKKY DIIDFELGVK ITGAGFPVYK GKGARLQRAL INYFLDKNTA AGYNEVQVPH LVNEASGYGT GQLPDKEGQM YHAGVDDLYL IPTAEVPVTN LFRDVILNES ELPILHTAYT PCFRREAGSY GAHVRGLNRL HQFDKVEIVR VEHPDNSYAA LDGMVEHVKN ILQELKLPYR ILRLCGGDMG FTSALTYDFE VFSTAQDRWL EISSVSNFET FQANRLKLRF KDKDGKNQLA HTLNGSSLAL PRVLAGILEN YQTPEGIVIP EVLRPYCGFD IID
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