Gene Fjoh_0602 details

Gene Information

• Locus tag: Fjoh_0602
• ID: 5090908
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: +
• Start bp: 643740
• End bp: 651215
• Gene Length: 7476 bp
• Protein Length: 2491 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 644740002
• Product: two component regulator
• Protein accession: YP_001192956
• Protein GI: 146298365
• COG category: [S] Function unknown
• COG ID: [COG4886] Leucine-rich repeat (LRR) protein

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGATCC AGATGAAATT AAAATATACA TTAGTTTTTA CTATTATTAG TTTTTTTATT 
AGTACTGCAG GGTTTGCTCA GCAGTATACA GATGAGGAAA TTGGGTTGAA TGTTTCTAAA 
ATAACAGCAT CATTAAAAGA AAAAGGTGTT GCAGAAGCTG ACATTGAATT TGAAATTTCG 
TTATTAAGAA AAATGCATAC GAATCAATAT GCCAAAATAA AACAAAATGA GAATGAAATT 
TTAAAAGAAA CAAAAGCAAA AGCACTGACT AATAAATCTG CGCTGACTGC AGATATTTCT 
TCAACAGAAA AAGCTGCTTT ACAAGCGTTA TACAACAGTA CAAATGGAGC CAATTGGATT 
AACAAACAAG GCTGGGACTT TAGTACTCCT GTTACCTCTT GGGATGGTAC TAATGGCTGG 
TATGGAATTA CTGTTACTAA TGGAACTATA ACAAGCATTA ATTTAGGACA AAATAATTTG 
ACTGGGACAT TAGCTTCAGA AATTGGTAGC TTAACTAATC TTCAACAACT CTATTTACAG 
GACAATGAGC TAAGTGGTGC TATTCCTAAT GAAATAGGAA ATTTATTAAG CTTAAAAATT 
CTTTATTTAA ATGATAATAA ATTAGCTGGA TCAATACCTA CACAAATGGG AAATCTTGTT 
AATCTAAGTC AGTTTGCTTT AAGTTTTAAT AAATTAAGTG GTTCAATTCC AAGCTCACTT 
GGGAATCTAA ATAATGTAGA GTTTTTTTTT ATAGGGAACA ATGAACTTAC CGGTTCTATA 
CCACCTGAAA TTGGAAACTT ATCAAAAGTA ACTCATTTAT ACTTATATCA TAATCAATTA 
AGTGGTTCAA TACCAACTCA AATTGGGAAT CTTTCTAAGG TACAAGCTCT TTTTTTAGAA 
TACAATAATT TAAGTGGCTC TATACCAAAT GAAATAAGTA ATTTATCAAG TCTTAAATTT 
TTTAACTTAT CGAATAATCA ATTAACTGGA CCAATACCTA CCGGAATTGG TAACTTATAT 
TATAACCTAC TAGAAGTTTA TTTTAGAAAC AATCAGTTAA GCGGTCCATT AACTAACGAT 
ATTTTACTAT ACAACCTTGT ATCTCTTTAT TTAGATAATA ATCAATTAAG CGGTCCAATA 
CCTAGCAGCA TTAACCGATT AAGAAACATT GGCTTACTTT ATCTCGATCA CAATCAATTT 
ACAGGTACAA TTCCAGCAAA TATTGGTAAC CTTCCTGAAG CAATACATCT TAATTTAAGT 
AATAATCAAT TAACAGGTAC AATTCCTCCT GAACTAGGTG GATTATCTAA AGTGCAAATG 
CTAGATTTGT CTTTTAATCA ATTAACTGGT TCCATACCTT TAGAAATAGG CAATTTAACA 
TCCATTCGTA ATTTATTCTT AAACAACAAT GAATTTAGCG GCACTATACC AAGCAGGCTT 
ACACAGTTAA CTTTAATTGG AAATTTTTAT ATTAATAATA ACAAATTTCG TTTTATAGAC 
TTTGCAAATG AGTATCAAAC ATATAAAAAT TTTTATGGTT TTAAATATGT TGATCAAGCA 
AAAACAGATA CAAAAGAAAC CAAAAATTTT GATATTGGAA GTTCCACAAC TCTTACAATG 
TGTACTGATA ACAGGTACAC TATTAATGAT ACTTTTCAAT GGTATAAAGG TAAATTTCCT 
GATGGAGGTT TAATCAACGG AGCAACAAAC AGAGAATATA CAATTTCAAA TCTTGGTGCA 
TCTGATGCTG GGGATTATTA CTGTTTATCT TCACATCCGC AGATAACTAT TGCGACAAAT 
CCAGATCGAA ATTTAGTTTT AGAAAGAGAA CCTATTACTT TAAAAATAGC TTGTGCTACA 
GAAGTAACTG GAGCTTCTAT AATGCCATCT AACAATAGTT TTACAACTGA TACAAATATT 
GAATTTTATC TTGACAGTAC TTATCCAAAT TTAACCTATA ATTGGACCTT TTATAATTTA 
GATAACACTC CTAATGAAAC TTATGAGGGT AATTATATTT TAAAATCATT CGATACACCT 
GGAACTTATA GAATGAACTT AATTGTTATG CAGGAAAATG GCTGTACAAC AAGTTTTGAT 
AAATATATAA CTGTCAAATA TGCTAATCCT TGTTTGTCTT CAGAAACTGG TTCTATAATA 
GTTAAAGGTT TTGATTATGA TTATAATAAT TTACCAAATA ATGTATTTAG TAATACATCT 
ACTTACTTTA GTTTTGATAC AATGAGTCGA AATCTAAGTT ATAATTGGAA ATTTTATAAT 
CCTGATGGTA CATTCTTAAC AAGTAAGCCT TACCAGTCAT TTGATATCAT TTTTGAGAAT 
AATGGTGAAC ATAAAGTTGT TTTAGAAATT ACAGATTTAT ATGGCTGTAC AGCTACATTC 
GAAAAAATAA TTCCTGTTAT TAAAGATTGT AGAAAAACTG GAGTAATACT TACATATGAA 
GGGTCCAGCC TAGATGAAAT ATTAGAAAAC ACTTCACTAA GTGTTAAACT TTTTGGTAAT 
GATTTTGACC TAGATGGAAA ACAATTCGAT TGGGAATTTT TAAATCCAAA TGGAAGTATT 
GTTTCAACAG GGTCAAATCC AGTTTTTACT GTCACTCCTC CAACAGTTGG AAACTATAGA 
ATAAATCTTA AAATAACAGA TCCCGAAAGT GATTGCGTAT ATGATTTTAG TGTCGTTTTA 
GAAGCTGTTG ACGCATGTCG AATGACACAT TTAACTCGTA ATGGTTATAT CAGTCTAAAC 
GGTCAATCTG AATACCTTAA TGATGTATTA TTTCTAGACC TTAATCAAAC TGTTGAGTTA 
GGGCTTTTCC GTGAGTGGTA TAATGAAACG GGTAAAACTT TTAATCTCGA ATGGAATTTT 
TATAGTCCAA ATTCTGAATT AATCAGTACA GGAAATCAAC CAAGATTCCC TATAACATTG 
ACGACTGAAG GCTTTTATAA AGTAACATTA AAAGTTACTG ATCCTGAAAC AGGATGTTTT 
ACAGAAGTTT CAAGAAAATT TAGCAGTGTA AAACAAAATA GTTGCACACT AACAAACGAA 
AGATCAAATC AAGTAAAAGA TTTGACTAGA GCTCTGATAA AAAAACTTAT TCTTCGAACT 
GTAACTGGAG AAACAGATGC TCAAATAAAT GCCAGCCCGT TTTTAGAAGA ATTTACTTCT 
CTAAAGCCAT TTATTATTAA TTCGCCTAAT GATAAAATAT ATAATTATAA AACAACCAGA 
AATAAATTTG GTATTCTTAT AAATGTAGAT TTTTCATTTT CACCAGAAAG AGAATCAGAT 
GTTCATATTT CAGTACGAGA CGGACTTTTT ACTAATTTCC AACGCGATTA CGTATATAAA 
AATATAGATG ATGCTGTTTA TATAGATATT AATCAATATG TTACGGCAGA TGAAACTTTA 
CTTTCATGTT GGACTTATGC TAAAGACAGA TCATTAGCAA AATCAGCTTT AGAGCAAAAA 
GACTGCAGGT ATTCTTCAGA AATTAAAAAC ATTAATTTCT GTCCAAATCC TTGTACTCCA 
ATCGTTGGAA CGATGAAAAC ATCTAGTAAT GATTTCTTTA CTAACAGAAA AACAGTTTTT 
TCTCTAGAGA CTTTATCGAC AGATCTAACT TATAAGTGGA CATTTTATAA TTCAGATAAT 
ACGAGTTTTA CAAATTTCAC GACTAGCAAT GTGGATTATT TGTATAGAAC TGCCGGAAAT 
TATAATGTTG TTCTAGAAGT TACAGATTCA AAAGGATGCA GCGCTACATT TGAAAAGACT 
ATTGTAGTAA GTGTGAATAC AAACTGTGTT TCACTTCCTG GTACAATATT GACATCTACT 
CCAGAAGTAT ATGTTAGTAA AAACACTACT TTTTCATTTG AAACTCCGGC AACAGATCTA 
ACTTACAAAT GGATATTTAC TCAAAATAAG ACTAATGAAT CAACCGTTTT CTTCTCTAAA 
ACAGTAGATT TTACCTACCT ATTACCCGGA TCAAGTGAAA TTAGACTGGA GGTTACAGAT 
TCGAATGGAT GTAAATCTAT CTTTCAAAAA TCAGTTACTA TCAAACAAAG TACTTCTTTA 
TGCGATAATG TAATCCAATT TGGCCGTTCT TATATCCAGG TTGGAACAGA TAGTGATCTA 
TTCAAATCTG CAACAATTTC TGTAAATCAA ACTACAAATA TTACTTTCTC TAGTCAGAAC 
TATTCTCCTC AATATGATTT AGAATATAAA TGGAGTTTGT TAAATGAAGA TGATCAAGTA 
GTCGATTCAG GAAACAATTT AAATTTTCCT ATAACGCCTG TAAAAGGAGG TTATTATAAA 
GCAGTTTTAG ATCTTAAAGA TCATACCAGT GGCTGTGTAT ACCAATTAGT CAGATCAATA 
GTATGTACTA TTCCTAGCAG CTGTACAGGA ACAAATCCTC AATCCACCGT TGTAAAAGGG 
TTAGTTATTA ACCTATTAAA GAATTTAATT TCAAGGTCAA TGATGGGTGA AAGCGATGCA 
GACATTAATT CTAGTGCTGT ACCTACAGAA TTTAATACTT TAAAACCATA TATCACAACT 
AACACTGCAA AAAACAGGAT ATACAATTTT GCTACTACCA GAAGTACTGC TAACGAATTT 
ACAAGTGTCT CTTTTTCATT TTCACCAGAA AGAGCATCAG ATATTTATAT TTCTATTCCT 
CATAGTTTAC AATATTCTCA AGGTATGCCT TTAGATTATT TACTTTCTAT GATTGAATCT 
AAAATATATA TTGATTTAAG TCAATATGCT TCTTCAAATC AATATTTAAT TTCGTGTCTA 
TCAGACTCAC AAGCTTCAGC TAAAAGTGTT TTACATACAG GTGATTGTTT ACGAGCATCT 
GAAATTCGCT ACATCGATTT TTGCCCTAAT GAATGTGATC CTTTGTTAGG TGTAATCAAA 
ACAAATTCAG AAATCGTTTC TTTAAATACC CCAGCAGTTT TTTCATTAGA AACTAATAAC 
GCTTCTGTCT TATCTTATAA TTGGACGTTT TACAATCCTG ACAATAGTGT AAGAGAAAAC 
CAAACAACTT CGAATGCTTT TCAGACTTAT ACAATTCCTG GAACTTATAA AGTTGAATTA 
GAAGCAAAAG ATGTAAATAA TTGCACTACA ACTTTAACGA AAATGATAAC TGTAGCGGCC 
CCAGCCTGTG TAGCAGCAAT TGGAACAATA AAAACAGTTT CTCCTAATAT ATTTACAGGA 
ACAAATACGG AATTCCTTTT TGAAACAACT GCAACAAATT TAACTTACGA ATGGACGCTA 
TACAGAAATG TAAACAGCAG TATAACTATA TTTACAACAA ATACTGCTAA TATTTACTAT 
TTAGATCCTG GCAATTACAA TGTTAAACTT ATCGTTACTG ATGCGAACGG TTGTAAAAAT 
ACTTTCCGTA CTACAGTAAC TGCTACAGTA AAACCACCTT GCGTTAATGT CGTTGGAGAG 
ATTAAAACTG CTAATCCTAT AATTTCAACA AATGAAAATA CTACGTTTTC TTTTGAAACA 
ACTGCTACTA TCCTTCGCTA TTATTGGACT TTTCACAGCT TAAATAATAC ACCCCTTTTA 
ACCACGACTG AAAGCAGTCC TACTTTAATG TATACTTTTC CTAATAATTA TAAAGTTACT 
TTAACTGTAT GGGATGAAAA CGATTGTTAT ACAATTATCG AAAAAAACAT TAATGTAGTT 
AGAGGATGTC CTGTTATTCC TGGATCTGCA AATATCCCGG AAACAGTTAC CAGCGGACAA 
ATTATTCCTT TTGAATATAG TACAACCAGT AATGGTGTAG GTTATAAATG GACATTCTAT 
AATTTAGACG GCTCAATTAA GTCAACATCA ACATCAAATA AAATAAATAA AGCTTATTAT 
GCAACTGGTA ATTACCGTGT GACTCTTGAA TTAAATGATT TGTTTAATTC TGGATGTAAA 
ACTACAATTG ACAAAATCGT TACTGTAACA GGTGAATGCG GTATTCAAGG CACAATAGCA 
TCAAACCCTG CTGCAGAAAG TATTTCATTA GACCAATATG TATATTTTTG GTTTGAAAGC 
GAAGCAATAG ATCTAAATTA CAAATGGACT GTTACTAAAC CTGATAATGT AAGTTCTCAA 
TATTCTACTG ATAAATATGC GCCATATTAT TTCCAATCTG GTTCAGGGAC ATATAAGATT 
GCCGTAGAAG TTTCAGATGG TAATGGGTGT ATATTAAATC TTGAAAAAAC ATATAATTTA 
GAATACGATT GTTCTCGAAA TACAGGCTTA GTAACTGGAT CAATTTATAA CAATAATCAT 
AAATTCTATT ATAGTTCAGA TGTCTTAATA AATGCTCCAA ACAAATTTAC TTTCTGGTAT 
GATTATAGTT CACAAGAAAA TCTGCCCGTT AATTGGGAAT TAACAGACCT TAACGGTTCT 
CTTATTTCAT CTGGAACAGA AAAAGAATTC ATCTTTACAC CTACAACATC AGCTGGCTTA 
ATTCTTAAAC TGACCATTAC AGATCAATAT GGCTGTCCTC ATCATTTTTC TAAAGAATTA 
AATGTTGTTG AAAAATGCCA ATTTTATGTA AGTGATATTT CTGGTGATAT TAATTTTGAC 
GAAGAGTACA GCTATAAAGT TGCTTTTATA GATGCAAATC AAACAAAAGA TTTAATTCTC 
CGCTCTTATG ATGAAAATGA TGGAAAGGTT TATACCTATC AATGGAATCT TTATGATTTA 
GATAATACAT TAGTAAGTAC CGGAGATCAA CAGAAATTTC CAATAACATT AACTAAAGCA 
GGATATTACA AGGTAACTCT TGACATAATT GATCCTGATA CTGACTGTCC TGTTCAGTTT 
ACTAAAAAAA TTGGTTGTGT AATTAATAAT TCTTGTACGG AGACTAATCC AAAATCACAA 
ATAGTAAAAG AACTGTATTT AGATTTTATG AGAAGTCTTG TCATGAGATG CTTACTTGGT 
GAAACTGACG AACAGATCAA TACAAGTCCT ATGACCCCGG AATTTACCGC TTTGGTACCG 
TACATTACAA ATGGTCCAAA AGATAAAATT TACAATTTCA AAACAAAATT AGGAGGAGAA 
AGCGGTAATA GTTTTGCAGG GTTTGAGTTC TCTTTTTCTC CAGATCGACA GTCAGATGTG 
TATTATTATA CCAGATGGTC ACTATATTAC AACAGTTGGG ATTTAGAGAA AACAATAGAT 
GACATTAATT ATACCTTATA TCTTGCATTG AATCAATACG TTGCTGCAGA TCAGTCACTT 
GTTTCTTGTT TTATTGATTA TGCATCTAAG ATGGCAGGTA AAAATGTAAA CCATTTAGAA 
ACAGACGAAT GTCTGTTCCA GACAGCTGTT CAATATATTG AGTTTTGTCC GCCGGAAGAT 
TGTAGTCCAA TTGCAGGAAC ACTCAAATCC ACACCTGTAG TAGGAATTCA AAAAACAGCA 
AAAAAGGCTC AATTAAAGCA AACTCCAAAA AAGTAA 

 

Protein sequence

MKIQMKLKYT LVFTIISFFI STAGFAQQYT DEEIGLNVSK ITASLKEKGV AEADIEFEIS 
LLRKMHTNQY AKIKQNENEI LKETKAKALT NKSALTADIS STEKAALQAL YNSTNGANWI 
NKQGWDFSTP VTSWDGTNGW YGITVTNGTI TSINLGQNNL TGTLASEIGS LTNLQQLYLQ 
DNELSGAIPN EIGNLLSLKI LYLNDNKLAG SIPTQMGNLV NLSQFALSFN KLSGSIPSSL 
GNLNNVEFFF IGNNELTGSI PPEIGNLSKV THLYLYHNQL SGSIPTQIGN LSKVQALFLE 
YNNLSGSIPN EISNLSSLKF FNLSNNQLTG PIPTGIGNLY YNLLEVYFRN NQLSGPLTND 
ILLYNLVSLY LDNNQLSGPI PSSINRLRNI GLLYLDHNQF TGTIPANIGN LPEAIHLNLS 
NNQLTGTIPP ELGGLSKVQM LDLSFNQLTG SIPLEIGNLT SIRNLFLNNN EFSGTIPSRL 
TQLTLIGNFY INNNKFRFID FANEYQTYKN FYGFKYVDQA KTDTKETKNF DIGSSTTLTM 
CTDNRYTIND TFQWYKGKFP DGGLINGATN REYTISNLGA SDAGDYYCLS SHPQITIATN 
PDRNLVLERE PITLKIACAT EVTGASIMPS NNSFTTDTNI EFYLDSTYPN LTYNWTFYNL 
DNTPNETYEG NYILKSFDTP GTYRMNLIVM QENGCTTSFD KYITVKYANP CLSSETGSII 
VKGFDYDYNN LPNNVFSNTS TYFSFDTMSR NLSYNWKFYN PDGTFLTSKP YQSFDIIFEN 
NGEHKVVLEI TDLYGCTATF EKIIPVIKDC RKTGVILTYE GSSLDEILEN TSLSVKLFGN 
DFDLDGKQFD WEFLNPNGSI VSTGSNPVFT VTPPTVGNYR INLKITDPES DCVYDFSVVL 
EAVDACRMTH LTRNGYISLN GQSEYLNDVL FLDLNQTVEL GLFREWYNET GKTFNLEWNF 
YSPNSELIST GNQPRFPITL TTEGFYKVTL KVTDPETGCF TEVSRKFSSV KQNSCTLTNE 
RSNQVKDLTR ALIKKLILRT VTGETDAQIN ASPFLEEFTS LKPFIINSPN DKIYNYKTTR 
NKFGILINVD FSFSPERESD VHISVRDGLF TNFQRDYVYK NIDDAVYIDI NQYVTADETL 
LSCWTYAKDR SLAKSALEQK DCRYSSEIKN INFCPNPCTP IVGTMKTSSN DFFTNRKTVF 
SLETLSTDLT YKWTFYNSDN TSFTNFTTSN VDYLYRTAGN YNVVLEVTDS KGCSATFEKT 
IVVSVNTNCV SLPGTILTST PEVYVSKNTT FSFETPATDL TYKWIFTQNK TNESTVFFSK 
TVDFTYLLPG SSEIRLEVTD SNGCKSIFQK SVTIKQSTSL CDNVIQFGRS YIQVGTDSDL 
FKSATISVNQ TTNITFSSQN YSPQYDLEYK WSLLNEDDQV VDSGNNLNFP ITPVKGGYYK 
AVLDLKDHTS GCVYQLVRSI VCTIPSSCTG TNPQSTVVKG LVINLLKNLI SRSMMGESDA 
DINSSAVPTE FNTLKPYITT NTAKNRIYNF ATTRSTANEF TSVSFSFSPE RASDIYISIP 
HSLQYSQGMP LDYLLSMIES KIYIDLSQYA SSNQYLISCL SDSQASAKSV LHTGDCLRAS 
EIRYIDFCPN ECDPLLGVIK TNSEIVSLNT PAVFSLETNN ASVLSYNWTF YNPDNSVREN 
QTTSNAFQTY TIPGTYKVEL EAKDVNNCTT TLTKMITVAA PACVAAIGTI KTVSPNIFTG 
TNTEFLFETT ATNLTYEWTL YRNVNSSITI FTTNTANIYY LDPGNYNVKL IVTDANGCKN 
TFRTTVTATV KPPCVNVVGE IKTANPIIST NENTTFSFET TATILRYYWT FHSLNNTPLL 
TTTESSPTLM YTFPNNYKVT LTVWDENDCY TIIEKNINVV RGCPVIPGSA NIPETVTSGQ 
IIPFEYSTTS NGVGYKWTFY NLDGSIKSTS TSNKINKAYY ATGNYRVTLE LNDLFNSGCK 
TTIDKIVTVT GECGIQGTIA SNPAAESISL DQYVYFWFES EAIDLNYKWT VTKPDNVSSQ 
YSTDKYAPYY FQSGSGTYKI AVEVSDGNGC ILNLEKTYNL EYDCSRNTGL VTGSIYNNNH 
KFYYSSDVLI NAPNKFTFWY DYSSQENLPV NWELTDLNGS LISSGTEKEF IFTPTTSAGL 
ILKLTITDQY GCPHHFSKEL NVVEKCQFYV SDISGDINFD EEYSYKVAFI DANQTKDLIL 
RSYDENDGKV YTYQWNLYDL DNTLVSTGDQ QKFPITLTKA GYYKVTLDII DPDTDCPVQF 
TKKIGCVINN SCTETNPKSQ IVKELYLDFM RSLVMRCLLG ETDEQINTSP MTPEFTALVP 
YITNGPKDKI YNFKTKLGGE SGNSFAGFEF SFSPDRQSDV YYYTRWSLYY NSWDLEKTID 
DINYTLYLAL NQYVAADQSL VSCFIDYASK MAGKNVNHLE TDECLFQTAV QYIEFCPPED 
CSPIAGTLKS TPVVGIQKTA KKAQLKQTPK K