Gene Fjoh_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0542 
Symbol 
ID5089488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp575543 
End bp576838 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content37% 
IMG OID644739941 
Productphosphate-selective porin O and P 
Protein accessionYP_001192896 
Protein GI146298305 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.63282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAAAA GAAAAATATT AGCCGTTTTA TTATTGATAA CTTGCGCTGC GAATGCACAA 
GAAATAAATA AACAGGAAGT AAAAAACGAA GTGCTTCGCA TTTTAGATTC TATCAACAAA
GCAAAACTGC CGGATACTAA ATCTGGAGGA GGAGTTGAAG AACACTGGTA CGACAGAATC
TCTTTAAGAG GTTACGCTCA AATTAGATAC AACGGACTTT TTTCTACAAA CGATAAAGTT
TCCTGCGAGC AATGTGATAA ATCCTGGGGA ACAACTTCTA CAGCTCCAGA TGCAAAAGCA
AATAACGGGC TTTTTATCCG TCGTGCGCGT CTGGTATTTT CAGGACAGGT TCACCCAAAT
GTATTTTTCT ATTTCCAGCC GGATTTTGCC AGTTCACCAA GTACCGGAAT TCAGAATTTT
GTTCAAATTC GAGATCTTTA TTTTGATCTT TCTTTTGATA AGAAAAGAGA ATACCGTGTT
CGTATCGGGC AGAGTAAAAT TCCGTACGGC TTCGAAAATA TGCAGTCAAG TTCACAACGT
TTAACGATGG ATCGTGCCGA TGCAATCAAT AGTTCTATAT TAAATGAGCG TGATTTAGGA
ATGTTTTTCT ATTGGGCTCC AGCCGAAATT AGAGAACGTT TCAATATGCT GGTAAAAGAC
GGATACAAAG GTTCTGGCGA TTTTGGAGTA TTTGCTTTTG GAGTTTACAA TGGTCAGATT
GCTAATAAAT TAGACGGAAA CAGAGATTTA AATGTTGTAG CCAGAGTAAC CTATCCGTTT
GTAATTGGAA GCCAGATCAT CGAACCGGGA ATTCAGGCTT ATACAGGAAA ATGGGCATTT
ACTGGAGAAA TTTCTAATGG AGTAACCGTA AATGATCCGC AGTATGTAAA AGACCAAAGA
GTAGGAGCAA CATTTGTTTT GTATCCAAGA CCTTTTGGAA TCCAGACAGA ATACAATATC
GGAACAGGAC CTCGTTATAA TACCTTAACT AATACGGTAG ACGAAACAGA TTTAAATGGA
GGATATGTTT TGTTGAACTA TAAATGGGAT ATTAAAAAAC AGCACATTTA TCCATTTGCC
AAATTTCAAT ATTATGACGG AGGAAAGAAA TATGAAAAAG ATGCCAGAAG TTATGTCGTA
AGAGATTACG AATTTGGTAT CGAGTGGCAG CCAATTAAAG CTTTTGAATT AACAGCAGAA
TATGTAATTG CTGACAGAAC TTTTGAGGAC AGTGCGCTTC CAATAAACAG ACAACAAGGA
AATGTATTGC GATTGCAAGC GCAGTTTAAC TTCTAA
 
Protein sequence
MIKRKILAVL LLITCAANAQ EINKQEVKNE VLRILDSINK AKLPDTKSGG GVEEHWYDRI 
SLRGYAQIRY NGLFSTNDKV SCEQCDKSWG TTSTAPDAKA NNGLFIRRAR LVFSGQVHPN
VFFYFQPDFA SSPSTGIQNF VQIRDLYFDL SFDKKREYRV RIGQSKIPYG FENMQSSSQR
LTMDRADAIN SSILNERDLG MFFYWAPAEI RERFNMLVKD GYKGSGDFGV FAFGVYNGQI
ANKLDGNRDL NVVARVTYPF VIGSQIIEPG IQAYTGKWAF TGEISNGVTV NDPQYVKDQR
VGATFVLYPR PFGIQTEYNI GTGPRYNTLT NTVDETDLNG GYVLLNYKWD IKKQHIYPFA
KFQYYDGGKK YEKDARSYVV RDYEFGIEWQ PIKAFELTAE YVIADRTFED SALPINRQQG
NVLRLQAQFN F