| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0409 |
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| Symbol | |
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| ID | 5093292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | - |
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| Start bp | 421433 |
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| End bp | 422197 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 644739803 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001192764 |
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| Protein GI | 146298173 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.48547 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGATA ATCACTTTAA ATTTTCGAAT GCAGTTGTTG GACTTCCGCT GTTTTTTGTG
CTTTTTTTAT GGATAATTTA TTGGATTCAA ATTCGTTTTG ATGTCGATTT TTATCAAAAC
GGAATTTATC CGAGAGATTT TTCCGGATTG CAAGGTGTAT TATTTAGTCC TTTTATTCAC
GAAAACTTAG AGCATTTATA TAATAATTCA ATTCCGCTTT TAGTATTATT GGCAGCATTA
CAATTTTTCT ATCCGAAACA GTCATTTGTG GTAATTGTTT TTGGAATTTT ATTTTCGGGA
TTGATAACAT GGATTATCGG CAGGGCAAAT TTTCATATTG GAGCAAGCGG ACTGATTTAT
GTTTTGGTCA GCTTTATTTT CTTTAAAGGA ATTCAAACTA AATATTATCG ATTAGTGGCA
CTTTCATTGT CAGTTATCCT GCTTTATGGC GGAATGATTT GGTATGTATT TCCAGATGTA
GATAAAACAA TTTCCTGGGA AGGTCATCTG GCGGGATTCA TAACTGGATT TGGGCTTTCG
CTGTATTATA AAACTCCAGA GTATACAAAA CCTATAATTT ACGATTGGCA AAGACCAGAC
TTTGATCCTT CAGCAGATCC TTTCATGAAG CATTTTGATG AAGATGGTAA TTTTGTGAAT
ACCGAAGTTG TTGAAGAAGA AACAGAAAAT TTAGATTCTT TTTTTAATTC TAATATTACT
GTAAATTATA TTGTAACGAA ATCAGAATCA GGAGATAAAG GTTGA
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| Protein sequence | MNDNHFKFSN AVVGLPLFFV LFLWIIYWIQ IRFDVDFYQN GIYPRDFSGL QGVLFSPFIH
ENLEHLYNNS IPLLVLLAAL QFFYPKQSFV VIVFGILFSG LITWIIGRAN FHIGASGLIY
VLVSFIFFKG IQTKYYRLVA LSLSVILLYG GMIWYVFPDV DKTISWEGHL AGFITGFGLS
LYYKTPEYTK PIIYDWQRPD FDPSADPFMK HFDEDGNFVN TEVVEEETEN LDSFFNSNIT
VNYIVTKSES GDKG
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