Gene Fjoh_0347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0347 
Symbol 
ID5089548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp368915 
End bp369652 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content29% 
IMG OID644739741 
Productnucleotidyl transferase 
Protein accessionYP_001192702 
Protein GI146298111 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0798326 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATA TGAGCAAGAT TAATATAGTA ATCCCTATGG CTGGTTTAGG AAGTCGTTTT 
GCTAATGTAG GATACGAAAA GCCGAAACCA TTTATTGATG TTGATGGAAA GCCAATGATA
GTAAGGGTTT TAGATAATTT GAGTTATCCA GATGCTAATT ACATTTTAAT TGCTCGCAAA
GAACATTTAG AAAAGGAAAA AGAACTAGTT GTTCAGATTG AAAAAGAATA TAATGCCAAA
TTTATTGGTA TTGATAAATT AACTGAAGGT ACTGTTTGTA CAGTTTTGTA TGCTAGAAAA
TATATCAATA ATGAATTACC ATTGCTAATA GCTAATTCAG ATCAAATTGT CGATATATCA
ATACCGGATT TTATTAATGA TTGCTTTGAT AGAGATTTGG ATGGTTCGAT ACTAACTTTT
AAAGATATAG AATTAAATCC AAAATGGTCT TTTGCTAAAT TAAATGATGA TTTAGTTATT
GAAGTAAAAG AAAAAGAGGC TATATCAGAA TTTGCTACAG TTGGAATTTA TCTCTTTAAT
AAAGGCGCAC AATTTGTTGA TTCAGCCATA GATATGATTA TTGAAAATGA TCGCGTCAAC
AATGAGTTTT ATACTTGTCC AGTCTATAAT TATTTAATAA AAGACGGAGC AAGGATAGGA
ATTTATGATA TTGAATTTAG TAATATGCAT GGAATTGGAA CACCTGAAGA TTTAGAAGTA
TATTTAAAGA GATTATGA
 
Protein sequence
MINMSKINIV IPMAGLGSRF ANVGYEKPKP FIDVDGKPMI VRVLDNLSYP DANYILIARK 
EHLEKEKELV VQIEKEYNAK FIGIDKLTEG TVCTVLYARK YINNELPLLI ANSDQIVDIS
IPDFINDCFD RDLDGSILTF KDIELNPKWS FAKLNDDLVI EVKEKEAISE FATVGIYLFN
KGAQFVDSAI DMIIENDRVN NEFYTCPVYN YLIKDGARIG IYDIEFSNMH GIGTPEDLEV
YLKRL