Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0330 |
Symbol | |
ID | 5089531 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 351644 |
End bp | 352756 |
Gene Length | 1113 bp |
Protein Length | 370 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 644739724 |
Product | GDP-mannose 4,6-dehydratase |
Protein accession | YP_001192685 |
Protein GI | 146298094 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.125638 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATAG CACTTATTAC AGGGATTACA GGACAAGACG GTGCTTATTT AGCAGATTTG CTATTAAAAA AAGGATATGA AGTTCATGGA ATTAAACGTC GAAGTTCGTT GTTTAATACA GATAGAATAG ATCATTTGTA TCAAGATCCA CATGAAAAAA ATATTCGTTT TAAATTACAT TATGGTGATT TAAGTGATTC TACGAATCTT ATTCGGATTA TTCAGGAAGT TCAACCTGAT GAAATTTACA ATTTAGGAGC AATGAGTCAC GTAAAAGTGA GCTTTGATAC ACCTGAATAT ACAGCAAATG CAGATGGTAT AGGAACATTA AGATTATTAG AGGCTCTAAG AATATTAAAT CTTACTAAAA AAACGAAGAT TTATCAGGCT TCAACCTCAG AATTATATGG TTTGGTTCAG GCTGTTCCTC AATCTGAAAA TACCCCATTT TATCCAAGAT CACCTTATGC GGTAGCTAAG CTTTATGCAT ATTGGATAAC AGTGAATTAC CGTGAGGCTT ATGGCATTTT TGCTTGTAAC GGAATTCTAT TTAATCATGA AAGTCCACTA CGTGGAGAAA CGTTTGTAAC CCGTAAGATC ACTAGAGCAG TTTCTAAAAT GGCTCTAGGT CTTCAAGATT GTTTATATTT AGGAAATTTA GATGCTAGAC GTGATTGGGG ACATGCTAAA GATTATGTAG AAGCAATGTG GCTGATCTTG CAGCAAGATC AACCTGAAGA TTATGTTATT GCGACAGGAG TTACAACAAC CGTTAGAGAT TTTGTTAAAA TGTCATTTAA TGAAGTTGGT ATAGAGATTG AATTCAAAGG TGAGGGCATA GATGAAAAAG GATATATACG TTCATGTTCG AATCCTGCAT ACCAAATTGA AGCAGGAAAA GAAGTTGTTG TCGTAGATAC AGCCTATTTC CGTCCAACGG AAGTCGATTT ATTAATTGGT GATCCAACTA AAGCGAAGAC AAAACTAGGG TGGGAACCTA AATACGATTT GCCCTCATTA GTAAAAGAAA TGATGGCTGC AGATGTTGAA CATTTTCAAA AAGAAAAAGT TCTGAAGGAT GCAGGTTATT TTATTAAAAA TCAATTCGAA TAA
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Protein sequence | MKIALITGIT GQDGAYLADL LLKKGYEVHG IKRRSSLFNT DRIDHLYQDP HEKNIRFKLH YGDLSDSTNL IRIIQEVQPD EIYNLGAMSH VKVSFDTPEY TANADGIGTL RLLEALRILN LTKKTKIYQA STSELYGLVQ AVPQSENTPF YPRSPYAVAK LYAYWITVNY REAYGIFACN GILFNHESPL RGETFVTRKI TRAVSKMALG LQDCLYLGNL DARRDWGHAK DYVEAMWLIL QQDQPEDYVI ATGVTTTVRD FVKMSFNEVG IEIEFKGEGI DEKGYIRSCS NPAYQIEAGK EVVVVDTAYF RPTEVDLLIG DPTKAKTKLG WEPKYDLPSL VKEMMAADVE HFQKEKVLKD AGYFIKNQFE
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