Gene Fjoh_0330 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0330 
Symbol 
ID5089531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp351644 
End bp352756 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content34% 
IMG OID644739724 
ProductGDP-mannose 4,6-dehydratase 
Protein accessionYP_001192685 
Protein GI146298094 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1089] GDP-D-mannose dehydratase 
TIGRFAM ID[TIGR01472] GDP-mannose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.125638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATAG CACTTATTAC AGGGATTACA GGACAAGACG GTGCTTATTT AGCAGATTTG 
CTATTAAAAA AAGGATATGA AGTTCATGGA ATTAAACGTC GAAGTTCGTT GTTTAATACA
GATAGAATAG ATCATTTGTA TCAAGATCCA CATGAAAAAA ATATTCGTTT TAAATTACAT
TATGGTGATT TAAGTGATTC TACGAATCTT ATTCGGATTA TTCAGGAAGT TCAACCTGAT
GAAATTTACA ATTTAGGAGC AATGAGTCAC GTAAAAGTGA GCTTTGATAC ACCTGAATAT
ACAGCAAATG CAGATGGTAT AGGAACATTA AGATTATTAG AGGCTCTAAG AATATTAAAT
CTTACTAAAA AAACGAAGAT TTATCAGGCT TCAACCTCAG AATTATATGG TTTGGTTCAG
GCTGTTCCTC AATCTGAAAA TACCCCATTT TATCCAAGAT CACCTTATGC GGTAGCTAAG
CTTTATGCAT ATTGGATAAC AGTGAATTAC CGTGAGGCTT ATGGCATTTT TGCTTGTAAC
GGAATTCTAT TTAATCATGA AAGTCCACTA CGTGGAGAAA CGTTTGTAAC CCGTAAGATC
ACTAGAGCAG TTTCTAAAAT GGCTCTAGGT CTTCAAGATT GTTTATATTT AGGAAATTTA
GATGCTAGAC GTGATTGGGG ACATGCTAAA GATTATGTAG AAGCAATGTG GCTGATCTTG
CAGCAAGATC AACCTGAAGA TTATGTTATT GCGACAGGAG TTACAACAAC CGTTAGAGAT
TTTGTTAAAA TGTCATTTAA TGAAGTTGGT ATAGAGATTG AATTCAAAGG TGAGGGCATA
GATGAAAAAG GATATATACG TTCATGTTCG AATCCTGCAT ACCAAATTGA AGCAGGAAAA
GAAGTTGTTG TCGTAGATAC AGCCTATTTC CGTCCAACGG AAGTCGATTT ATTAATTGGT
GATCCAACTA AAGCGAAGAC AAAACTAGGG TGGGAACCTA AATACGATTT GCCCTCATTA
GTAAAAGAAA TGATGGCTGC AGATGTTGAA CATTTTCAAA AAGAAAAAGT TCTGAAGGAT
GCAGGTTATT TTATTAAAAA TCAATTCGAA TAA
 
Protein sequence
MKIALITGIT GQDGAYLADL LLKKGYEVHG IKRRSSLFNT DRIDHLYQDP HEKNIRFKLH 
YGDLSDSTNL IRIIQEVQPD EIYNLGAMSH VKVSFDTPEY TANADGIGTL RLLEALRILN
LTKKTKIYQA STSELYGLVQ AVPQSENTPF YPRSPYAVAK LYAYWITVNY REAYGIFACN
GILFNHESPL RGETFVTRKI TRAVSKMALG LQDCLYLGNL DARRDWGHAK DYVEAMWLIL
QQDQPEDYVI ATGVTTTVRD FVKMSFNEVG IEIEFKGEGI DEKGYIRSCS NPAYQIEAGK
EVVVVDTAYF RPTEVDLLIG DPTKAKTKLG WEPKYDLPSL VKEMMAADVE HFQKEKVLKD
AGYFIKNQFE