| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fjoh_0274 |
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| Symbol | |
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| ID | 5089842 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Flavobacterium johnsoniae UW101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009441 |
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| Strand | + |
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| Start bp | 291380 |
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| End bp | 292618 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 644739668 |
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| Product | RNA polymerase ECF-subfamily sigma factor |
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| Protein accession | YP_001192629 |
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| Protein GI | 146298038 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.433792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCACA AAGAACTTAT TCCCAATTTA TTCAGAACCG AATATCAAAA AATAGTTTCA
GTTCTCTGCA GCTTATTCGG AATTCAGCAT ATAGAAATTG CAGAAGATAT TGTAAGCGAC
ACTTTTTTGA CTGCTTCAGA AACCTGGGCC ATCAAAGGAA TTCCAGAAAA TCCAAGTGCG
TGGTTGTATA CTGTTGCCAA AAATAAAACC AAAAACTATC TGAAAAGAAA TAACCTTTTT
GAGACCAAAA TAGTTACCGA AATAAAACAC AATACTCCAT TAAACAATCC CCAAATCGAC
ATTGATTTAT CTGATCAAAA TATTGCCGAT AGTCAGCTCG CGATGATATT TACGGTTTCT
AATCCGTGTA ATTCTGAAGA AGCTCAAATT GCTCTTGCTT TAAATTTACT GTGTGGTTTT
GGAGTTGGTG AAATCTCTGA TGCTTTTTTA TCTAATAAAG AAGTTATTTA CAAAAGGATA
AATCGCGCCA AAGAAAAACT GAAGGAAGAA AATATAAAAA TTCAACATCC GAATAGCTCT
GAAATAAAAG ACAGAATCCA AACAGTTCTC AAAACGATTT ATCTGCTTTA TTCCGAAGGC
TACTACTCTA TTTCGCAAAA TACCACTTTA CGAAAGGACC TTTGTACCGA AGCCATGCGT
TTGACTTATT TATTGATTGA GAACGAAAGC ACCAATCTGC CTCAGACTAA CGCTTTAATG
GCGCTGATGT GTTTTCATTC TTCAAGATTT GATGCCCGAA CTGGTTTAAA GGGTGAAATT
ATTTTATACG AAGATCAGGA TCAATCGCTT TGGAATCAGG AATTAATAAA CAAAGGAACT
TATTTTCTGA GTCAGTCCTC AACTGGAAAT TCACTTTCAA AATACCACTT AGAAGCCGGA
ATTGCGTATT GGCATACTAT TAAAAAAGAA ACCATAGAGA AATGGGAAAA TATTCTGGAA
CTCTACAACA ATCTAATTAT TTTAGAATAT TCGCCAATTG CAGCATTAAA CAGAACTTAT
GCTTTATCTA AAGTTAAAGG TAAAGAAGAA GCCATTAAAG AAGCCGAAAA ATTGAATTTA
ACAGACAATC ATTTTTATTA TTCTTTACTC GGAAATCTCT ATTCTGAAGT TGATCCAAAT
AAAGCATTAC CACATTTTGA AACCGCATTT GGTTTAGCCA AAACGGCATC CGACAAAAAC
ATTATCAGCA AAAACATTGA GCAATTGAAA ACAAATTAG
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| Protein sequence | MEHKELIPNL FRTEYQKIVS VLCSLFGIQH IEIAEDIVSD TFLTASETWA IKGIPENPSA
WLYTVAKNKT KNYLKRNNLF ETKIVTEIKH NTPLNNPQID IDLSDQNIAD SQLAMIFTVS
NPCNSEEAQI ALALNLLCGF GVGEISDAFL SNKEVIYKRI NRAKEKLKEE NIKIQHPNSS
EIKDRIQTVL KTIYLLYSEG YYSISQNTTL RKDLCTEAMR LTYLLIENES TNLPQTNALM
ALMCFHSSRF DARTGLKGEI ILYEDQDQSL WNQELINKGT YFLSQSSTGN SLSKYHLEAG
IAYWHTIKKE TIEKWENILE LYNNLIILEY SPIAALNRTY ALSKVKGKEE AIKEAEKLNL
TDNHFYYSLL GNLYSEVDPN KALPHFETAF GLAKTASDKN IISKNIEQLK TN
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