Gene Fjoh_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFjoh_0257 
Symbol 
ID5091311 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFlavobacterium johnsoniae UW101 
KingdomBacteria 
Replicon accessionNC_009441 
Strand
Start bp276963 
End bp277913 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content35% 
IMG OID644739649 
ProductABC transporter related 
Protein accessionYP_001192612 
Protein GI146298021 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.784545 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTGATA TTCAAAATAT ATCTTTTTCG TATACTGACA AACCAGTTAT AAATAATGTT 
TCTTTTACGA TCAATAAAGG CGAGAATATT GCCATTATTG GTGAAAGCGG TTGTGGAAAA
AGTACGCTTT TAAAGCTTAT GTACGGTTTG TTCGATTTAG ATGAAGGAAA AATATTTTAT
AACGAAAAAC CTATTCTGGG ACCAAAATAC AATTTGATAC CGGGAATGCC TTATATGAAA
TATCTGGCAC AGGATTTCGA TTTGTCTCCT TACGAAACTG TTGCTGAAAA CGTTGGAAAG
TTTCTTTCGA ATGGTTTTGC CAATATGAAA AAACTTCGCG TTCAGGAGTT ATTGGAAATG
GTCGAGATGG ACCAGTTTTC AAATGTAAAA GCTAAATTTT TGAGCGGCGG ACAACAGCAG
CGAGTAGCAC TGGTTAGAGT TTTGGCTCTT GAACCAGAAG TTATTCTGCT GGATGAACCT
TTCAGCCAGA TTGATGCTTT TCGTAAAAAT GCTCTGCGCA GAAATTTATT CAAATATCTA
AAACAAAAAG AGATTACGTG TATTATTGCC ACACATGACA GCACTGATGC TTTGTCGTTT
GCAGATGAAG CTATCGTAAT GCGTCATGGT GAGATTGTTG TTAAAGGAGA TCCTTCAAAA
ATTTACGAAG ATCCTCAGAC TAAATATGTT GCTTCGTTGT TTGGAGAAGT AAATGAAGTT
GCAACACATT TACTGCTTCC TTATGAAGAT GAAACACATA AAACTTTGGT ATATCCGCAT
CAGTTTAAAA TGGTTGCAGA GTCAAAACTT CCGGTAAAAA TTAGAAGAAC TTATTTTAGA
GGAAGTCATT ATTTAATTGA AACCGTTTAT AAAAGACAAT TAATATTCTT CGAAAGCGAA
ATTGATCTTC CGCTCGAACA GGAAATTTTT CTTGGCTTGA ATTATTTATA A
 
Protein sequence
MLDIQNISFS YTDKPVINNV SFTINKGENI AIIGESGCGK STLLKLMYGL FDLDEGKIFY 
NEKPILGPKY NLIPGMPYMK YLAQDFDLSP YETVAENVGK FLSNGFANMK KLRVQELLEM
VEMDQFSNVK AKFLSGGQQQ RVALVRVLAL EPEVILLDEP FSQIDAFRKN ALRRNLFKYL
KQKEITCIIA THDSTDALSF ADEAIVMRHG EIVVKGDPSK IYEDPQTKYV ASLFGEVNEV
ATHLLLPYED ETHKTLVYPH QFKMVAESKL PVKIRRTYFR GSHYLIETVY KRQLIFFESE
IDLPLEQEIF LGLNYL