Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fjoh_0257 |
Symbol | |
ID | 5091311 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Flavobacterium johnsoniae UW101 |
Kingdom | Bacteria |
Replicon accession | NC_009441 |
Strand | - |
Start bp | 276963 |
End bp | 277913 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644739649 |
Product | ABC transporter related |
Protein accession | YP_001192612 |
Protein GI | 146298021 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.784545 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTGATA TTCAAAATAT ATCTTTTTCG TATACTGACA AACCAGTTAT AAATAATGTT TCTTTTACGA TCAATAAAGG CGAGAATATT GCCATTATTG GTGAAAGCGG TTGTGGAAAA AGTACGCTTT TAAAGCTTAT GTACGGTTTG TTCGATTTAG ATGAAGGAAA AATATTTTAT AACGAAAAAC CTATTCTGGG ACCAAAATAC AATTTGATAC CGGGAATGCC TTATATGAAA TATCTGGCAC AGGATTTCGA TTTGTCTCCT TACGAAACTG TTGCTGAAAA CGTTGGAAAG TTTCTTTCGA ATGGTTTTGC CAATATGAAA AAACTTCGCG TTCAGGAGTT ATTGGAAATG GTCGAGATGG ACCAGTTTTC AAATGTAAAA GCTAAATTTT TGAGCGGCGG ACAACAGCAG CGAGTAGCAC TGGTTAGAGT TTTGGCTCTT GAACCAGAAG TTATTCTGCT GGATGAACCT TTCAGCCAGA TTGATGCTTT TCGTAAAAAT GCTCTGCGCA GAAATTTATT CAAATATCTA AAACAAAAAG AGATTACGTG TATTATTGCC ACACATGACA GCACTGATGC TTTGTCGTTT GCAGATGAAG CTATCGTAAT GCGTCATGGT GAGATTGTTG TTAAAGGAGA TCCTTCAAAA ATTTACGAAG ATCCTCAGAC TAAATATGTT GCTTCGTTGT TTGGAGAAGT AAATGAAGTT GCAACACATT TACTGCTTCC TTATGAAGAT GAAACACATA AAACTTTGGT ATATCCGCAT CAGTTTAAAA TGGTTGCAGA GTCAAAACTT CCGGTAAAAA TTAGAAGAAC TTATTTTAGA GGAAGTCATT ATTTAATTGA AACCGTTTAT AAAAGACAAT TAATATTCTT CGAAAGCGAA ATTGATCTTC CGCTCGAACA GGAAATTTTT CTTGGCTTGA ATTATTTATA A
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Protein sequence | MLDIQNISFS YTDKPVINNV SFTINKGENI AIIGESGCGK STLLKLMYGL FDLDEGKIFY NEKPILGPKY NLIPGMPYMK YLAQDFDLSP YETVAENVGK FLSNGFANMK KLRVQELLEM VEMDQFSNVK AKFLSGGQQQ RVALVRVLAL EPEVILLDEP FSQIDAFRKN ALRRNLFKYL KQKEITCIIA THDSTDALSF ADEAIVMRHG EIVVKGDPSK IYEDPQTKYV ASLFGEVNEV ATHLLLPYED ETHKTLVYPH QFKMVAESKL PVKIRRTYFR GSHYLIETVY KRQLIFFESE IDLPLEQEIF LGLNYL
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