Gene Fjoh_0213 details

Gene Information

• Locus tag: Fjoh_0213
• ID: 5094541
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Flavobacterium johnsoniae UW101
• Kingdom: Bacteria
• Replicon accession: NC_009441
• Strand: -
• Start bp: 224829
• End bp: 225608
• Gene Length: 780 bp
• Protein Length: 259 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 644739606
• Product: TPR repeat-containing protein
• Protein accession: YP_001192569
• Protein GI: 146297978

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTACTT ACAATAAAAG AGGATATAAA GCACCAAAAG AGAAGGAAGT TAAAGAAGTA 
ACTGAAGAAC AACAGGTGGT AATTGATGAA AAAGACAGCA CAACTGCTGG TGTTTTTTCT 
AAATTAGACG AAACTGCTTC AAGAACTGAG GATTGGGTTG CTAAAAATCA AAAAATCATT 
ATTGGTTTAG TTGCTGGTAT TGCAGTTGCT ACTATTGGTT ATTTGGCTTA CCAAAAATTT 
ATTGAAACTC CTAAACAAGA CGAAGCTGCA AACGAAATGT TTGTTGCACA GCAAAATTTT 
CAAAAAGCTG TTGATGGTGT AGCAAGTGAT TCATTATACA AATTAGCATT AAACGGATCT 
GAAGGTAAAT TTGGATTTGT GAAAATTGCT GACGAATATT CTGGAACTGA TGCAGGAAAT 
TTAGCAAACT ACTATGCTGG TATGGCATAT TTAAATACAG GTAAATTTGA CGATGCTATT 
AAGTATTTAG GCGAATTTAA ATCTGAAGAT ATGATTTTAG GCGCTCTAGC AAAAGGAGCT 
ATTGGAGATG CTTACTCTCA AAAAAATAAC CAAAAAGAAG CTTTAGATTA TTATGTAAAA 
GCTGCTGAAT CAAACAAAAA CGATTTTACT ACACCTCGTT TCTTGTTAAA AGCTGCTAAA 
ACTGCTTTAG CTTTAGGACA AAAAGAAGAC GCTTTGAAAT ATTTAAATAA TATTAAAGAT 
AATTTCGATG CTGCTCCAGA AGCTGCTTCT GTTGAGGCAT TGATTGGATT AGCGCAATAA 

 

Protein sequence

MATYNKRGYK APKEKEVKEV TEEQQVVIDE KDSTTAGVFS KLDETASRTE DWVAKNQKII 
IGLVAGIAVA TIGYLAYQKF IETPKQDEAA NEMFVAQQNF QKAVDGVASD SLYKLALNGS 
EGKFGFVKIA DEYSGTDAGN LANYYAGMAY LNTGKFDDAI KYLGEFKSED MILGALAKGA 
IGDAYSQKNN QKEALDYYVK AAESNKNDFT TPRFLLKAAK TALALGQKED ALKYLNNIKD 
NFDAAPEAAS VEALIGLAQ